- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA865891
- Biosample
- SAMN30141941
- Accession No.
- GCA_025759855.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Sun Yat-Sen University
- Released Date
- 2025-02-23
- NCBI Released Date
- 2022-10-20
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_025759855.1 | - | - | ASM2575985v1 | Draft genome in scaffold level | 2022-10-20 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 787,360,660 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 388 |
| GC content | 34.5 |
| Scaffold sequence No. | 388 |
| Scaffold L50 | 6 |
| Scaffold N50 (bp) | 65,004,680 |
| Scaffold N75 (bp) | 63,734,703 |
| Scaffold N90 (bp) | 54,014,636 |
| Contig sequence No. | 534 |
| Contig L50 | 22 |
| Contig N50 (bp) | 11,281,108 |
| Unique components No. | 388 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 146 |
| Ns gap sequence region length (bp) | 14,600 |
| Gaps No. between scaffolds | 0 |