- Scientific Name
- Corchorus olitorius
- Common Names
- Nalta jute;
- Bioproject
- PRJNA215141
- Biosample
- SAMN03160584
- Accession No.
- GCA_001974825.2
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Basic & Applied Research on Jute Project, Bangladesh Jute Research Institute
- Released Date
- 2023-11-11
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 334,898,824 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 24,917 |
| GC content | 35.5 |
| Contig sequence No. | 24,917 |
| Contig L50 | 2,076 |
| Contig N50 (bp) | 44,999 |
| Unique components No. | 24,917 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 35704 | 472 | 77 | 1010 | 1317 | 0 | 38580 |