Genome Warehouse

Scientific Name: Amaranthus tricolor
Common Names: Chinese spinach, tampala; Amaranthus gangeticus, Amaranthus mangostanus
Bioproject: PRJNA891371
Biosample: SAMN31325361
Accession No.: GCA_026212465.1
RefSeq Accession No.: GCF_026212465.1
RefSeq vs GenBank similarity: -
Source: NCBI
External Links: NCBI
Submitter Organization: Chinese Academy of Agricultural Sciences
Released Date: 2025-02-23
NCBI Released Date: 2022-11-18
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Download: DNA
RefSeq Download: RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
Publication(s)

Assembly Accession	RefSeq Accession	RefSeq vs GenBank similarity	Assembly Name	Assembly Level	NCBI Released Date	Download Files
GCA_026212465.1	GCF_026212465.1	-	ASM2621246v1	Draft genome in scaffold level	2022-11-18	DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

Genome size (bp)	520,084,113
Chromosomes, organellas and plasmids sequnece No.	17
Genome sequence No.	48
GC content	32
Scaffold sequence No.	48
Scaffold L50	8
Scaffold N50 (bp)	31,692,477
Scaffold N75 (bp)	26,347,435
Scaffold N90 (bp)	24,324,110
Contig sequence No.	2,544
Contig L50	99
Contig N50 (bp)	905,879
Unique components No.	48
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	2,496
Ns gap sequence region length (bp)	1,371,009
Gaps No. between scaffolds	0

Genome size (bp)	520,234,831
Chromosomes, organellas and plasmids sequnece No.	18
Genome sequence No.	49
GC content	32
Scaffold sequence No.	49
Scaffold L50	8
Scaffold N50 (bp)	31,692,477
Scaffold N75 (bp)	26,347,435
Scaffold N90 (bp)	24,324,110
Contig sequence No.	2,545
Contig L50	100
Contig N50 (bp)	901,270
Unique components No.	49
No. of regions with alternate loci or patches	0
Ns gap sequence No. (bp)	2,496
Ns gap sequence region length (bp)	1,371,009
Gaps No. between scaffolds	0

Annotation of Whole Genome Assembly

asse

	Protein	trna	rrna	ncrna	Pseudogene	Others	Total
Total	24770	648	3964	1862	1152	0	32396