- Scientific Name
- Solanum lycopersicum
- Common Names
- tomato; Lycopersicon esculentum, Lycopersicon esculentum var. esculentum, Solanum esculentum, Solanum lycopersicum var. humboldtii
- Bioproject
- PRJNA809001
- Biosample
- SAMN26852763
- Accession No.
- GCA_027704885.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Cornell University
- Released Date
- 2023-11-22
- NCBI Released Date
- 2023-01-11
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_027704885.1 | - | - | ASM2770488v1 | Draft genome in chromosome level | 2023-01-11 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 880,292,284 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 5,156 |
| GC content | 35 |
| Scaffold sequence No. | 5,156 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 54,559,284 |
| Scaffold N75 (bp) | 40,293,557 |
| Scaffold N90 (bp) | 40,854 |
| Contig sequence No. | 6,409 |
| Contig L50 | 402 |
| Contig N50 (bp) | 600,000 |
| Unique components No. | 5,156 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 1,253 |
| Ns gap sequence region length (bp) | 125,300 |
| Gaps No. between scaffolds | 0 |