- Scientific Name
- Populus trichocarpa
- Common Names
- western balsam poplar; black cottonwood; Populus balsamifera subsp. trichocarpa
- Bioproject
- PRJNA887116
- Biosample
- SAMN29046698
- Accession No.
- GCA_028534865.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- UCLA
- Released Date
- 2025-02-24
- NCBI Released Date
- 2023-02-07
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- -
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_028534865.1 | - | - | ddPopTric1.0.hap2 | Draft genome in chromosome level | 2023-02-07 | DNA |
Statistics of Genome Assembly
| Genome size (bp) | 423,209,812 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 338 |
| GC content | 35 |
| Scaffold sequence No. | 338 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 20,659,291 |
| Scaffold N75 (bp) | 15,746,902 |
| Scaffold N90 (bp) | 15,103,051 |
| Contig sequence No. | 371 |
| Contig L50 | 11 |
| Contig N50 (bp) | 12,129,884 |
| Unique components No. | 338 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 33 |
| Ns gap sequence region length (bp) | 3,300 |
| Gaps No. between scaffolds | 0 |