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  • Salvia miltiorrhiza
  • IMPLAD_Smil_shh
    • Scientific Name
    Salvia miltiorrhiza
    Common Names
    Chinese salvia, dan shen, redroot sage; Salvia miltiorhiza
    Bioproject
    PRJNA903271
    Biosample
    SAMN31793759
    Accession No.
    GCA_028751815.1
    RefSeq Accession No.
    GCF_028751815.1
    RefSeq vs GenBank similarity
    -
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    Chinese Academy of Medical Sciences & Peking Union Medical College
    Released Date
    2025-02-24
    NCBI Released Date
    2023-02-24
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Download
    DNA
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_028751815.1 GCF_028751815.1 - IMPLAD_Smil_shh Draft genome in scaffold level 2023-02-24 DNA
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 530,963,680
    Chromosomes, organellas and plasmids sequnece No. 8
    Genome sequence No. 171
    GC content 37.5
    Scaffold sequence No. 171
    Scaffold L50 4
    Scaffold N50 (bp) 60,279,590
    Scaffold N75 (bp) 56,432,337
    Scaffold N90 (bp) 45,638,638
    Contig sequence No. 866
    Contig L50 171
    Contig N50 (bp) 1,012,308
    Unique components No. 171
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 695
    Ns gap sequence region length (bp) 2,248,997
    Gaps No. between scaffolds 0

    Statistics of Genome Assembly

    Genome size (bp) 531,614,244
    Chromosomes, organellas and plasmids sequnece No. 10
    Genome sequence No. 173
    GC content 37.5
    Scaffold sequence No. 173
    Scaffold L50 4
    Scaffold N50 (bp) 60,279,590
    Scaffold N75 (bp) 56,432,337
    Scaffold N90 (bp) 45,638,638
    Contig sequence No. 868
    Contig L50 171
    Contig N50 (bp) 1,012,308
    Unique components No. 173
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 695
    Ns gap sequence region length (bp) 2,248,997
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 32434 631 777739 1165 0 42046