- Scientific Name
- Persea americana
- Common Names
- avocado; Persea tolimanensis, Persea americana var. tolimanensis, Laurus persea, Persea gratissima
- Bioproject
- PRJNA818813
- Biosample
- SAMN26884147
- Accession No.
- GCA_029852735.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- University of Queensland
- Released Date
- 2023-12-10
- NCBI Released Date
- 2023-04-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 912,940,922 |
| Chromosomes, organellas and plasmids sequnece No. | 12 |
| Genome sequence No. | 482 |
| GC content | 40 |
| Scaffold sequence No. | 482 |
| Scaffold L50 | 5 |
| Scaffold N50 (bp) | 84,298,359 |
| Scaffold N75 (bp) | 55,055,587 |
| Scaffold N90 (bp) | 51,931,824 |
| Contig sequence No. | 518 |
| Contig L50 | 11 |
| Contig N50 (bp) | 27,582,756 |
| Unique components No. | 482 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 36 |
| Ns gap sequence region length (bp) | 3,600 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 42442 | 0 | 0 | 0 | 0 | 0 | 42442 |