- Scientific Name
- Magnolia sinica
- Common Names
- Manglietia sinica, Manglietiastrum sinicum, Pachylarnax sinica (Y.W.Law) N.H.Xia & C.Y.Wu
- Bioproject
- PRJNA774088
- Biosample
- SAMN33820282
- Accession No.
- GCA_029962835.1
- RefSeq Accession No.
- GCF_029962835.1
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Ori-Gene Co. Ltd.
- Released Date
- 2025-02-07
- NCBI Released Date
- 2023-05-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Download
- DNA
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_029962835.1 | GCF_029962835.1 | - | MsV1 | Draft genome in scaffold level | 2023-05-12 | DNA RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 1,839,595,854 |
| Chromosomes, organellas and plasmids sequnece No. | 21 |
| Genome sequence No. | 130 |
| GC content | 40 |
| Scaffold sequence No. | 130 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 92,164,922 |
| Scaffold N75 (bp) | 82,624,792 |
| Scaffold N90 (bp) | 73,752,208 |
| Contig sequence No. | 202 |
| Contig L50 | 14 |
| Contig N50 (bp) | 44,871,976 |
| Unique components No. | 130 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 72 |
| Ns gap sequence region length (bp) | 6,018 |
| Gaps No. between scaffolds | 0 |
Statistics of Genome Assembly
| Genome size (bp) | 1,838,578,862 |
| Chromosomes, organellas and plasmids sequnece No. | 19 |
| Genome sequence No. | 127 |
| GC content | 40 |
| Scaffold sequence No. | 127 |
| Scaffold L50 | 8 |
| Scaffold N50 (bp) | 92,164,922 |
| Scaffold N75 (bp) | 82,624,792 |
| Scaffold N90 (bp) | 73,752,208 |
| Contig sequence No. | 199 |
| Contig L50 | 14 |
| Contig N50 (bp) | 44,871,976 |
| Unique components No. | 127 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 72 |
| Ns gap sequence region length (bp) | 6,018 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 27846 | 434 | 50 | asse11458 | 1770 | 0 | 41558 |