- Scientific Name
- Salmonella enterica subsp. enterica serovar Hvittingfoss
- Common Names
- -
- Bioproject
- PRJNA556438
- Biosample
- SAMN05589873
- Accession No.
- GCA_009650055.1
- RefSeq Accession No.
- GCF_009650055.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Microbiological Diagnostic Unit
- Released Date
- 2023-12-10
- NCBI Released Date
- 2019-11-12
- Assembly Level
- Complete genome
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_009650055.1 | GCF_009650055.1 | identical | ASM965005v1 | Draft genome in contig level | 2019-11-12 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,744,949 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 52 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 4,744,949 |
| Scaffold N75 (bp) | 4,744,949 |
| Scaffold N90 (bp) | 4,744,949 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4345 | 86 | 22 | 10 | 93 | 3 | 4559 |
Statistics of Genome Assembly
| Genome size (bp) | 4,744,949 |
| Chromosomes, organellas and plasmids sequnece No. | 1 |
| Genome sequence No. | 1 |
| GC content | 52 |
| Scaffold sequence No. | 1 |
| Scaffold L50 | 1 |
| Scaffold N50 (bp) | 4,744,949 |
| Scaffold N75 (bp) | 4,744,949 |
| Scaffold N90 (bp) | 4,744,949 |
| Unique components No. | 1 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 0 |
| Ns gap sequence region length (bp) | 0 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 4326 | 86 | 22 | asse10 | 124 | 3 | 4571 |