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  • Streptococcus pseudopneumoniae
  • ASM1171485v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA302716
    Biosample
    SAMN10587704
    Accession No.
    GCA_011714855.1
    RefSeq Accession No.
    GCF_011714855.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    TAILORED-Treatment project
    Released Date
    2024-01-04
    NCBI Released Date
    2020-03-24
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_011714855.1 GCF_011714855.1 identical ASM1171485v1 Draft genome in chromosome level 2020-03-24 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,165,344
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 55
    GC content 40
    Scaffold sequence No. 55
    Scaffold L50 8
    Scaffold N50 (bp) 82,262
    Scaffold N75 (bp) 53,879
    Scaffold N90 (bp) 28,977
    Contig sequence No. 57
    Contig L50 9
    Contig N50 (bp) 73,593
    Unique components No. 55
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 2
    Ns gap sequence region length (bp) 192
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2061 39 3 0 220 3 2326

    Statistics of Genome Assembly

    Genome size (bp) 2,165,344
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 55
    Scaffold sequence No. 55
    Scaffold L50 8
    Scaffold N50 (bp) 82,262
    Scaffold N75 (bp) 53,879
    Scaffold N90 (bp) 28,977
    Contig sequence No. 57
    Contig L50 9
    Contig N50 (bp) 73,593
    Unique components No. 55
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 2
    Ns gap sequence region length (bp) 192
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 1971 39 30 216 3 2232