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  • Streptococcus pseudopneumoniae
  • ASM1171491v1
    • Scientific Name
    Streptococcus pseudopneumoniae
    Common Names
    -
    Bioproject
    PRJNA302716
    Biosample
    SAMN10587700
    Accession No.
    GCA_011714915.1
    RefSeq Accession No.
    GCF_011714915.1
    RefSeq vs GenBank similarity
    identical
    Source
    NCBI
    External Links
    NCBI
    Submitter Organization
    TAILORED-Treatment project
    Released Date
    2023-11-16
    NCBI Released Date
    2020-03-24
    Assembly Level
    Draft genome in scaffold level
    Genome Representation
    Full Genome
    Download
    DNA GFF RNA CDS Protein
    RefSeq Download
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
    Publication(s)
    -
    Assembly Accession RefSeq Accession RefSeq vs GenBank similarity Assembly Name Assembly Level NCBI Released Date Download Files
    GCA_011714915.1 GCF_011714915.1 identical ASM1171491v1 Draft genome in chromosome level 2020-03-24 DNA GFF RNA CDS Protein
    RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein

    Statistics of Genome Assembly

    Genome size (bp) 2,211,663
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 84
    Scaffold sequence No. 84
    Scaffold L50 11
    Scaffold N50 (bp) 62,624
    Scaffold N75 (bp) 30,149
    Scaffold N90 (bp) 14,694
    Contig sequence No. 85
    Contig L50 11
    Contig N50 (bp) 62,624
    Unique components No. 84
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 91
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2100 39 4 0 229 3 2375

    Statistics of Genome Assembly

    Genome size (bp) 2,211,663
    Chromosomes, organellas and plasmids sequnece No. 0
    Genome sequence No. 84
    GC content 39.5
    Scaffold sequence No. 84
    Scaffold L50 11
    Scaffold N50 (bp) 62,624
    Scaffold N75 (bp) 30,149
    Scaffold N90 (bp) 14,694
    Contig sequence No. 85
    Contig L50 11
    Contig N50 (bp) 62,624
    Unique components No. 84
    No. of regions with alternate loci or patches 0
    Ns gap sequence No. (bp) 1
    Ns gap sequence region length (bp) 91
    Gaps No. between scaffolds 0
    Annotation of Whole Genome Assembly
    asse
    Protein trna rrna ncrna Pseudogene Others Total
    Total 2009 39 40 235 3 2290