- Scientific Name
- Eubacterium callanderi
- Common Names
- -
- Bioproject
- PRJNA645702
- Biosample
- SAMN15514058
- Accession No.
- GCA_013425495.1
- RefSeq Accession No.
- GCF_013425495.1
- RefSeq vs GenBank similarity
- identical
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- UNC-Chapel Hill
- Released Date
- 2024-06-02
- NCBI Released Date
- 2020-07-19
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein
- Publication(s) -
| Assembly Accession | RefSeq Accession | RefSeq vs GenBank similarity | Assembly Name | Assembly Level | NCBI Released Date | Download Files |
|---|---|---|---|---|---|---|
| GCA_013425495.1 | GCF_013425495.1 | identical | ASM1342549v1 | Draft genome in chromosome level | 2020-07-19 | DNA GFF RNA CDS Protein RefSeq DNA RefSeq GFF RefSeq RNA RefSeq CDS RefSeq Protein |
Statistics of Genome Assembly
| Genome size (bp) | 4,328,095 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 85 |
| GC content | 47.5 |
| Scaffold sequence No. | 85 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 159,030 |
| Scaffold N75 (bp) | 78,776 |
| Scaffold N90 (bp) | 34,121 |
| Contig sequence No. | 87 |
| Contig L50 | 10 |
| Contig N50 (bp) | 159,030 |
| Unique components No. | 85 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 325 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3928 | 53 | 11 | 1 | 157 | 3 | 4153 |
Statistics of Genome Assembly
| Genome size (bp) | 4,328,095 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 85 |
| Scaffold sequence No. | 85 |
| Scaffold L50 | 10 |
| Scaffold N50 (bp) | 159,030 |
| Scaffold N75 (bp) | 78,776 |
| Scaffold N90 (bp) | 34,121 |
| Contig sequence No. | 87 |
| Contig L50 | 10 |
| Contig N50 (bp) | 159,030 |
| Unique components No. | 85 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 2 |
| Ns gap sequence region length (bp) | 325 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3883 | 53 | 11 | asse1 | 203 | 3 | 4154 |