- Scientific Name
- Sphingomonadales bacterium
- Common Names
- -
- Bioproject
- PRJNA629336
- Biosample
- SAMN18061490
- Accession No.
- GCA_017304125.1
- RefSeq Accession No.
- -
- RefSeq vs GenBank similarity
- -
- Source
- NCBI
- External Links
- NCBI
- Submitter Organization
- Jill Banfield Lab (University of California Berkeley)
- Released Date
- 2024-01-04
- NCBI Released Date
- 2021-03-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Download
- DNA GFF RNA CDS Protein
- RefSeq Download
- -
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 2,933,246 |
| Chromosomes, organellas and plasmids sequnece No. | 0 |
| Genome sequence No. | 612 |
| GC content | 66.5 |
| Scaffold sequence No. | 612 |
| Scaffold L50 | 135 |
| Scaffold N50 (bp) | 6,617 |
| Scaffold N75 (bp) | 3,791 |
| Scaffold N90 (bp) | 2,275 |
| Contig sequence No. | 626 |
| Contig L50 | 138 |
| Contig N50 (bp) | 6,398 |
| Unique components No. | 612 |
| No. of regions with alternate loci or patches | 0 |
| Ns gap sequence No. (bp) | 14 |
| Ns gap sequence region length (bp) | 970 |
| Gaps No. between scaffolds | 0 |
Annotation of Whole Genome Assembly
| Protein | trna | rrna | ncrna | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 3030 | 25 | 0 | 0 | 53 | 3 | 3111 |