病毒株名 hCoV-19/Shandong/LY007-2/2020
序列号 EPI_ISL_414940
宿主 Homo sapiens
采样日期 2020-01-25
采样地点 China / Shandong
谱系 B (Version: 4.0.6)
序列完整度 Complete
质量评估 0/0/1/13/Yes
样本提供单位 Beijing Institute of Microbiology and Epidemiology
数据递交单位 Beijing Institute of Microbiology and Epidemiology
发布时间 2020-03-17 14:48:10


年龄 35
性别 M
职业 NA
发作日期 2020-01-26
入院日期 2020-01-26
旅行史/接触史 Close contacts of Patients 3
严重程度 Paucisymptomatic
病患状态 Recovered and were discharged to home isolation for 14 days
临床症状及潜伏天数 Paucisymptomatic, with only an occasional cough, chest CT showed on no significant abnormalities
临床检测 Chest CT images
基础病史 NA
其他病原菌感染 NA
合并症 NA
临床用药和处理 NA
生理生化指标追踪 NA
出院日期 2020-02-16
相关文献 Transmission potential of asymptomatic and paucisymptomatic SARS-CoV-2 infections: a three-family cluster study in China. [PMID: 32319519]


参考序列 2019-nCoV (MN908947.3)
病毒株名 hCoV-19/Shandong/LY007-2/2020 (EPI_ISL_414940)
SNP数目 12
Insertion数目 0
Deletion数目 3
Indel数目 0
相似度 99.95
质量评估分级 B2
注释统计 15(synonymous_variant:1; intergenic_variant:12; missense_variant:2)
文件下载 (GFF3)
The variation information in this file was calculated based on sequence EPI_ISL_414940.The original sequence can be obtained from GISAID's website.