Transcriptome analysis in Hevea brasiliensis latex revealed changes in hormone signalling pathways during ethephon stimulation and consequent Tapping Panel Dryness.

Pascal Montoro, Shuangyang Wu, Bénédicte Favreau, Eva Herlinawati, Cécile Labrune, Marie-Laure Martin-Magniette, Stéphanie Pointet, Maryannick Rio, Julie Leclercq, Sigit Ismawanto
Author Information
  1. Pascal Montoro: CIRAD, UMR AGAP, F-34398, Montpellier, France. pascal.montoro@cirad.fr.
  2. Shuangyang Wu: CIRAD, UMR AGAP, F-34398, Montpellier, France.
  3. Bénédicte Favreau: CIRAD, UMR AGAP, F-34398, Montpellier, France.
  4. Eva Herlinawati: Indonesian Rubber Research Institute, Sembawa Research Centre, Palembang, Indonesia.
  5. Cécile Labrune: Institute of Plant Sciences Paris Saclay IPS2, CNRS, INRA, Université Paris-Sud, Université Evry, Université Paris-Saclay, Bâtiment 630, 91405, Orsay, France.
  6. Marie-Laure Martin-Magniette: Institute of Plant Sciences Paris Saclay IPS2, CNRS, INRA, Université Paris-Sud, Université Evry, Université Paris-Saclay, Bâtiment 630, 91405, Orsay, France.
  7. Stéphanie Pointet: CIRAD, UMR AGAP, F-34398, Montpellier, France.
  8. Maryannick Rio: CIRAD, UMR AGAP, F-34398, Montpellier, France.
  9. Julie Leclercq: CIRAD, UMR AGAP, F-34398, Montpellier, France.
  10. Sigit Ismawanto: Indonesian Rubber Research Institute, Sembawa Research Centre, Palembang, Indonesia.
  11. Kuswanhadi: Indonesian Rubber Research Institute, Sembawa Research Centre, Palembang, Indonesia.

Abstract

Tapping Panel Dryness (TPD) affects latex production in Hevea brasiliensis. This physiological syndrome involves the agglutination of rubber particles, which leads to partial or complete cessation of latex flow. Latex harvesting consists in tapping soft bark. ethephon can be applied to stimulate latex flow and its regeneration in laticifers. Several studies have reported transcriptome changes in bark tissues. This study is the first report on deep RNA sequencing of latex to compare the effect of ethephon stimulation and TPD severity. Trees were carefully selected for paired-end sequencing using an Illumina HiSeq 2000. In all, 43 to 60 million reads were sequenced for each treatment in three biological replicates (slight TPD trees without ethephon stimulation, and slight and severe TPD trees with ethephon treatment). Differentially expressed genes were identified and annotated, giving 8,111 and 728 in response to ethephon in slight TPD trees and in ethephon-induced severe TPD trees, respectively. A biological network of responses to ethephon and TPD highlighted the major influence of metabolic processes and the response to stimulus, especially wounding and jasmonate depression in TPD-affected trees induced by ethephon stimulation.

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MeSH Term

Gene Expression Regulation, Plant
Gene Regulatory Networks
Hevea
Latex
Organophosphorus Compounds
Plant Bark
Plant Diseases
Plant Growth Regulators
Principal Component Analysis
RNA, Plant
Sequence Analysis, RNA
Signal Transduction
Transcriptome

Chemicals

Latex
Organophosphorus Compounds
Plant Growth Regulators
RNA, Plant
ethephon

Word Cloud

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