Cutting Edge: Distinct B Cell Repertoires Characterize Patients with Mild and Severe COVID-19.

Kenneth B Hoehn, Palaniappan Ramanathan, Avraham Unterman, Tomokazu S Sumida, Hiromitsu Asashima, David A Hafler, Naftali Kaminski, Charles S Dela Cruz, Stuart C Sealfon, Alexander Bukreyev, Steven H Kleinstein
Author Information
  1. Kenneth B Hoehn: Department of Pathology, Yale School of Medicine, New Haven, CT.
  2. Palaniappan Ramanathan: Department of Pathology, The University of Texas Medical Branch at Galveston, Galveston, TX. ORCID
  3. Avraham Unterman: Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT. ORCID
  4. Tomokazu S Sumida: Department of Neurology, School of Medicine, Yale University, New Haven, CT. ORCID
  5. Hiromitsu Asashima: Department of Neurology, School of Medicine, Yale University, New Haven, CT.
  6. David A Hafler: Department of Neurology, School of Medicine, Yale University, New Haven, CT. ORCID
  7. Naftali Kaminski: Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT. ORCID
  8. Charles S Dela Cruz: Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT. ORCID
  9. Stuart C Sealfon: Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY. ORCID
  10. Alexander Bukreyev: Department of Pathology, The University of Texas Medical Branch at Galveston, Galveston, TX.
  11. Steven H Kleinstein: Department of Pathology, Yale School of Medicine, New Haven, CT; steven.kleinstein@yale.edu. ORCID

Abstract

Protective immunity against COVID-19 likely depends on the production of SARS-CoV-2-specific plasma cells and memory B cells postinfection or postvaccination. Previous work has found that germinal center reactions are disrupted in severe COVID-19. This may adversely affect long-term immunity against reinfection. Consistent with an extrafollicular B cell response, patients with severe COVID-19 have elevated frequencies of clonally expanded, class-switched, unmutated plasmablasts. However, it is unclear whether B cell populations in individuals with mild COVID-19 are similarly skewed. In this study, we use single-cell RNA sequencing of B cells to show that in contrast to patients with severe COVID-19, subjects with mildly symptomatic COVID-19 have B cell repertoires enriched for clonally diverse, somatically hypermutated memory B cells ∼30 d after the onset of symptoms. This provides evidence that B cell responses are less disrupted in mild COVID-19 and result in the production of memory B cells.

References

  1. Nat Commun. 2022 Jan 21;13(1):440 [PMID: 35064122]
  2. Immunity. 2019 Aug 20;51(2):337-350.e7 [PMID: 31375460]
  3. Immunity. 2020 Dec 15;53(6):1136-1150 [PMID: 33326765]
  4. Nat Immunol. 2020 Dec;21(12):1506-1516 [PMID: 33028979]
  5. Annu Rev Immunol. 2012;30:429-57 [PMID: 22224772]
  6. Front Immunol. 2013 Nov 15;4:358 [PMID: 24298272]
  7. Nature. 2021 Mar;591(7851):639-644 [PMID: 33461210]
  8. Eur J Immunol. 2016 Feb;46(2):480-92 [PMID: 26614343]
  9. J Immunol. 2017 Mar 15;198(6):2489-2499 [PMID: 28179494]
  10. Sci Immunol. 2020 Jul 15;5(49): [PMID: 32669287]
  11. Nucleic Acids Res. 2013 Jul;41(Web Server issue):W34-40 [PMID: 23671333]
  12. Nat Commun. 2018 Nov 9;9(1):4735 [PMID: 30413720]
  13. Nat Commun. 2017 Jan 16;8:14049 [PMID: 28091601]
  14. Cell Host Microbe. 2020 Oct 7;28(4):516-525.e5 [PMID: 32941787]
  15. Cell. 2020 Aug 20;182(4):843-854.e12 [PMID: 32673567]
  16. Cell. 2021 Jan 7;184(1):169-183.e17 [PMID: 33296701]
  17. Cell. 2020 Oct 1;183(1):143-157.e13 [PMID: 32877699]
  18. Nat Biotechnol. 2018 Jun;36(5):411-420 [PMID: 29608179]
  19. Lancet Infect Dis. 2020 May;20(5):533-534 [PMID: 32087114]
  20. Bioinformatics. 2015 Oct 15;31(20):3356-8 [PMID: 26069265]
  21. Nat Med. 2020 Jul;26(7):1070-1076 [PMID: 32514174]
  22. Front Immunol. 2020 Jun 16;11:1441 [PMID: 32612615]
  23. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61 [PMID: 15608191]
  24. Nat Biotechnol. 2012 May 07;30(5):423-33 [PMID: 22565972]

Grants

  1. R01 HL141852/NHLBI NIH HHS
  2. R01 HL127349/NHLBI NIH HHS
  3. UL1 TR001863/NCATS NIH HHS
  4. R01 AI104739/NIAID NIH HHS
  5. UH2 HL123886/NHLBI NIH HHS
  6. U01 HL145567/NHLBI NIH HHS

MeSH Term

B-Lymphocytes
COVID-19
Cohort Studies
Humans
SARS-CoV-2