PPR78 - Plant Editosome Database - CNCB-NGDC

Summary

Editing Factor: PPR78
Synonym: NA
Description: NA
Protein Family: Pentatricopeptide repeat (PPR) protein
Subclass: DYW
Physical Interaction: NA
Construct Structure: PLS-E1-E2-DYW
Gene ID & Species: XP_024361076.1 (Physcomitrium patens)
Edited Gene(s): cox1    rps14
Editing Type(s): C-to-U (4)
Publication(s): [1] Conservation of the moss RNA editing factor PPR78 despite the loss of its known cytidine-to-uridine editing sites is explained by a hidden extra target, The Plant Cell, 2024. [doi:10.1093/plcell/koad292]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Nuclear Genome Organelle Genome Other Region Other Position Editing Type Codon Amino Acid Molecular Effect Experiment Details
Physcomitrium patens XP_024361076.1 Mitochondrion cox1 755 CDS NA NA NA NA C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlNo mutantNormalNANAThe Taq-based (Promega, Blirt) PCR assays contained primers99.00%HighNone38000897
NAKO-PPR78KnockoutNAKnockoutNormalNANAThe Taq-based (Promega, Blirt) PCR assays contained primers0.00%UneditedAbsent38000897
Physcomitrium patens XP_024361076.1 Mitochondrion rps14 137 CDS NA NA NA NA C-to-U NA=>NA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
NAWTControlControlNo mutantNormalNANAThe Taq-based (Promega, Blirt) PCR assays contained primers80.00%HighNone38000897
NAKO-PPR78KnockoutNAKnockoutNormalNANAThe Taq-based (Promega, Blirt) PCR assays contained primers0.00%UneditedAbsent38000897
Last update: Sep 2026 (version 2.0)