PPR78 - Plant Editosome Database - CNCB-NGDC
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- PPR78
Summary
| Editing Factor: |
PPR78 |
| Synonym: |
NA |
| Description: |
NA |
| Protein Family: |
Pentatricopeptide repeat (PPR) protein
|
| Subclass: |
DYW
|
| Physical Interaction: |
NA
|
| Construct Structure: |
PLS-E1-E2-DYW
|
| Gene ID & Species: |
XP_024361076.1 (Physcomitrium patens)
|
| Edited Gene(s): |
cox1 rps14
|
| Editing Type(s): |
C-to-U (4)
|
| Publication(s): |
[1] Conservation of the moss RNA editing factor PPR78 despite the loss of its known cytidine-to-uridine editing sites is explained by a hidden extra target, The Plant Cell, 2024. [doi:10.1093/plcell/koad292]
|
Editing Details
| Species |
Gene ID |
Organelle |
Edited Gene |
Position |
Region |
Nuclear Genome |
Organelle Genome |
Other Region |
Other Position |
Editing Type |
Codon |
Amino Acid |
Molecular Effect |
Experiment Details |
| Physcomitrium patens |
XP_024361076.1 |
Mitochondrion |
cox1
|
755 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT | Control | Control | No mutant | Normal | NA | NA | The Taq-based (Promega, Blirt) PCR assays contained primers | 99.00% | High | None | 38000897 | | NA | KO-PPR78 | Knockout | NA | Knockout | Normal | NA | NA | The Taq-based (Promega, Blirt) PCR assays contained primers | 0.00% | Unedited | Absent | 38000897 |
|
| Physcomitrium patens |
XP_024361076.1 |
Mitochondrion |
rps14
|
137 |
CDS |
NA |
NA |
NA |
NA |
C-to-U |
NA=>NA |
S=>L |
Recoding |
|
Experiment Details
| Genotype (Ecotype) |
Allele |
Treatment |
Treatment Detail |
Mutant Type |
Phenotype |
Tissue |
Development Stage |
Detection Method |
Editing Frequency |
Editing Extent |
Mutant Effect |
PMID |
| NA | WT | Control | Control | No mutant | Normal | NA | NA | The Taq-based (Promega, Blirt) PCR assays contained primers | 80.00% | High | None | 38000897 | | NA | KO-PPR78 | Knockout | NA | Knockout | Normal | NA | NA | The Taq-based (Promega, Blirt) PCR assays contained primers | 0.00% | Unedited | Absent | 38000897 |
|
Last update: Sep 2026
(version 2.0)