orf25 - Plant Editosome Database - BIG Data Center

Summary

Gene: orf25
Function: ORF
Species: 6
Editing Factors:1 (MORF8)
Editing Types:
C-to-U (97)
Editing Events: 101 (C-to-U: 97   NA: 4)
External Link: NCBI Gene
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid
Arabidopsis thalianaMitochondrion18
C-to-U: 16
NA: 2
188084-188662
188247
188268
188412
188413
188415
188448
188525
188574
NA
NA
NA
NA
NA
NA
NA
NA
CDS
NA
NA
NA
NA
NA
CDS
NA
NA
NA
+
-
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
NA
C-to-U
C-to-U
C-to-U
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
NA=>NA
Beta vulgaris subsp. maritimaMitochondrion12
C-to-U: 12
337690
337747
337765
337794
337891
337903
337924
337926
337927
338058
338071
338083
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
+C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
CUA=>UUA
UCC=>UUC
CCU=>CUU
CGU=>UGU
UCA=>UUA
UCG=>UUG
UCA=>UUA
CCG=>UCG
UCA=>UUA
CCG=>CUG
CCA=>CUA
CCC=>CUC
L=>L
S=>F
P=>L
R=>C
S=>L
S=>L
S=>L
P=>S
S=>L
P=>L
P=>L
P=>L
Beta vulgaris subsp. vulgarisMitochondrion12
C-to-U: 12
54730
54742
54755
54886
54887
54889
54910
54922
55019
55048
55066
55123
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCA=>CUA
UCA=>UUA
UCC=>UUC
UCA=>UUA
CCG=>CUG
CUA=>UUA
CCG=>UCG
CCC=>CUC
CGU=>UGU
UCG=>UUG
CCU=>CUU
S=>L
P=>L
S=>L
S=>F
S=>L
P=>L
L=>L
P=>S
P=>L
R=>C
S=>L
P=>L
Brassica napusMitochondrion16
C-to-U: 16
41472
41493
41637
41638
41640
41673
41750
41799
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
UCA=>UUA
ACU=>AUU
ACU=>AUU
CCG=>UCG
CCG=>UCG
AUC=>AUU
AUC=>AUU
UCG=>UUG
UCG=>UUG
CCU=>CUU
CCU=>CUU
CCG=>CUG
CCG=>CUG
UCA=>UUA
UCA=>UUA
S=>L
S=>L
T=>I
T=>I
P=>S
P=>S
I=>I
I=>I
S=>L
S=>L
P=>L
P=>L
P=>L
P=>L
S=>L
S=>L
Oryza sativa Japonica GroupMitochondrion9
C-to-U: 9
18577
18598
18745
18875
18904
18917
18922
18934
18937
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
CDS
-C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
C-to-U
UCA=>UUA
CCG=>UCG
UCU=>UUU
UCA=>UUA
CCA=>CUA
UCA=>UUA
CCG=>CUG
ACU=>AUU
CGU=>UGU
S=>L
P=>S
S=>F
S=>L
P=>L
S=>L
P=>L
T=>I
R=>C
Species Organelle Editing Events Editing Types Genomic Position Region Strand Type Codons Amino Acid

( NA = Data Not Available )

Last update: Jul 2021 (version 1.0)