MORF8 - Plant Editosome Database - BIG Data Center

Summary

Editing Factor: MORF8
Synonym: MORF8, MULTIPLE ORGANELLAR RNA EDITING FACTOR 8, RIP1, RNA-EDITING FACTOR INTERACTING PROTEIN 1
Description: Encodes a protein that interacts with the protein RARE1 and broadly affects RNA editing.
Protein Family: MORF/RIP
Subclass: NA
Construct Structure: NA
Gene ID & Species: AT3G15000 (Arabidopsis thaliana)
Edited Gene(s): rps12    petL    ndhD    ndhB    rpoC1    accD    rpoB    ndhF    ccmFN2    ccmB    ccmC    ccmFN1    cob    cox2    matR    nad2    nad3    nad4L    nad5    nad6    nad7    orf25    mttB    rpl2    rpl5    rpl16    rps3    rps4
Editing Type(s): C-to-U (150)
Publication(s): [1] RIP1, a member of an Arabidopsis protein family, interacts with the protein RARE1 and broadly affects RNA editing, PNAS, 2012. [PMID=22566615]

Editing Details

Species Gene ID Organelle Edited Gene Position Region Editing Type Codon Amino Acid Molecular Effect Experiment Details
Arabidopsis thaliana AT3G15000 Chloroplast accD 794 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay98.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay98.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay83.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 28 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 71 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 80 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 128 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 148 CDS C-to-U CCG/CCG=>UCG/UUG P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 159 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 160 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 164 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 172 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 179 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 181 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 193 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 194 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 286 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 304 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 367 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 379 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 380 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 424 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 467 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 475 CDS C-to-U CCA/CCA=>UCA/UUA P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 476 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 485 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 512 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 514 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 551 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmB 554 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 467 CDS C-to-U GCU=>GUU A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 473 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 575 CDS C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 608 CDS C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 614 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 618 CDS C-to-U ACC=>ACU T=>T Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmC 650 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 104 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 157 CDS C-to-U CCU=>UCU P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 289 CDS C-to-U CUU=>UUU L=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 378 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 709 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 710 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN1 779 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN2 65 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN2 208 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN2 226 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion ccmFN2 356 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion cob 325 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion cob 568 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion cox2 27 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion cox2 138 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion cox2 278 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion matR 1731 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion matR 1751 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion matR 1771 CDS C-to-U CGC=>UGC R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion matR 1807 CDS C-to-U CAC=>UAC H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion matR 1895 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 97 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 144 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 145 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 164 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 173 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 364 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 406 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 407 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 412 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 440 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 474 CDS C-to-U CUC=>CUU L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 530 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 538 CDS C-to-U CCA=>UCA P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 552 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 581 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 587 CDS C-to-U CCA/CCA=>CUA/UUA P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 643 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 665 CDS C-to-U UCC/UCC=>UUC/UUU S=>F/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 693 CDS C-to-U AUC=>AUU I=>I Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 700 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion mttB 705 CDS C-to-U UUC=>UUU F=>F Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad2 90 CDS C-to-U UCC/UCC=>UCU/UUU S=>S/F Synonymous/Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad3 64 CDS C-to-U CUA=>UUA L=>L Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad3 211 CDS C-to-U CCU/CCU=>UCU/UUU P=>S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad3 212 CDS C-to-U CCU/CCU=>CUU/UUU P=>L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad3 254 CDS C-to-U CCC=>CUC P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad4L 41 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad4L 55 CDS C-to-U CGG=>UGG R=>W Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad4L 86 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad4L 95 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad5 608 CDS C-to-U GCC/GCC=>GUC/GUU A=>V/V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad6 53 CDS C-to-U GCA=>GUA A=>V Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad6 88 CDS C-to-U CCC/CCC/CCC/CCC=>UCC/UUC/UCU/UUU P=>S/F/S/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad6 89 CDS C-to-U CCC/CCC/CCC/CCC=>CUC/UUC/CUU/UUU P=>L/F/L/F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad6 161 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion nad7 963 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 467 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay85.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay85.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay68.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 586 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay94.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay93.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay84.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 746 CDS C-to-U UCU=>UUU S=>F Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay98.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay97.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay96.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 830 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay98.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay98.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay95.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 836 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay95.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay95.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay92.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhB 1481 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay94.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay96.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay89.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhD 2 CDS C-to-U ACG=>AUG T=>M Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay57.00%MediumNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay58.00%MediumSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay26.00%LowDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhD 383 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay98.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay98.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay94.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast ndhF 290 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay98.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay98.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay95.00%HighDecreased22566615
Arabidopsis thaliana AT3G15000 Mitochondrion orf25 395 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Chloroplast petL 5 CDS C-to-U CCU=>CUU P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay87.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay87.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay35.00%LowDecreased22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl16 512 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl2 212 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl5 47 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl5 58 CDS C-to-U CCG/CCG=>UCG/UUG P=>S/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl5 59 CDS C-to-U CCG/CCG=>CUG/UUG P=>L/L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rpl5 92 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Chloroplast rpoB 2432 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay83.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay85.00%HighSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay91.00%HighIncreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast rpoC1 488 CDS C-to-U UCA=>UUA S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay62.00%HighNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay57.00%MediumSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay74.00%HighIncreased22566615
Arabidopsis thaliana AT3G15000 Chloroplast rps12 58 Intronic C-to-U NA=>NA NA=>NA NA
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11WTNo treatmentNo treatmentNo treatmentNo treatmentNANAPoisoned Primer Extension (PPE) Assay16.00%PoorNone22566615
FLAG_150D11rip1 (+/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHeterozygousNANANAPoisoned Primer Extension (PPE) Assay18.00%PoorSimilar22566615
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANAPoisoned Primer Extension (PPE) Assay42.00%MediumIncreased22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps12 84 CDS C-to-U CCC=>CCU P=>P Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps12 221 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps12 269 CDS C-to-U UCG=>UUG S=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps3 1470 CDS C-to-U UCC=>UCU S=>S Synonymous
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps3 1534 CDS C-to-U CGU=>UGU R=>C Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps4 175 CDS C-to-U CCG=>UCG P=>S Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps4 235 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps4 308 CDS C-to-U CCA=>CUA P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps4 332 CDS C-to-U CCG=>CUG P=>L Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Arabidopsis thaliana AT3G15000 Mitochondrion rps4 967 CDS C-to-U CAU=>UAU H=>Y Recoding
Experiment Details
Genotype (Ecotype) Allele Treatment Treatment Detail Mutant Type Phenotype Tissue Development Stage Detection Method Editing Frequency Editing Extent Mutant Effect PMID
FLAG_150D11rip1 (-/-)T-DNA InsertionT-DNA is inserted 140 bp upstream of the RIP1 coding regionHomozygousDwarf phenotypeNANART-PCR bulk sequencing0.00%UneditedAbsent22566615
Last update: Jul 2021 (version 1.0)