Plant
Editosome
Database
Summary
| Species: | Arabidopsis thaliana |
| NCBI Taxonomy: | 3702 |
| Organelle: | Chloroplast (NC_000932.1); Mitochondrion (NC_001284.2) |
| Editing Factors: | 124 (ECB2, MEF14, VAC1, SLO1, OTP82, LOI1, MEF11, PPR596, LPA66, CRR28, CRR22, CRR4, MEF1, TADA, RARE1, MEF22, MEF18, MEF19, MEF20, MEF21, ORRM4, PPME, SLO4, EMP9, PDM2, ISE2, ORRM5, ELI1, DOT4, CRR21, ORRM1, MEF12, REME2, PPO1, OTP84, CREF7, QED1, MEF26, MEF8, MEF8S, SLO2, MORF8, MEF7, MEF3, DYW1, MEF29, SLG1, MEF10, MEF25, TAD2, TAD3, WTG1, NUWA, DYW2, HEMC, ORRM6, DEK36, GRS1, AEF1, SEL1, OCP3, OTP87, MEF9, YS1, CLB19, ORRM2, ORRM3, MEF13, OZ1, MEF35, MORF1, MORF3, MORF4, MORF6, MORF2, MORF9, ECD1, SMK6, COD1, CREF3, CWM1, CWM2, EMB2261, OTP80, OTP81, OTP85, OTP86, OTP71, OTP72, PDM1, MEF31, REME1, PGN, MREF1, MREF2, OTP90, MEF37, MEF46, MEF47, AHG11, MEF32, MEF57, MPR25, TSL1, DG1, RRD2, RID4, MEF100, POCO1, BLX, TRX z, OTP970, PPR1, MEF28, DG409, PAP2, CP31A, CP31B, RPOTp, GEND2, Lon1, SL1, EMB1417, HDS) |
| Edited Genes: | 50 |
| Editing Sites: | 510 |
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| accD | 2 | 57869 58642 | CDS 3'UTR | + NA | mRNA mRNA | C-to-U C-to-U | UCG=>UUG NA=>NA | S=>L NA=>NA |
| atpF | 1 | 11992 | CDS | - | mRNA | C-to-U | CCA=>CUA | P=>L |
| clpP | 1 | 69942 | CDS | - | mRNA | C-to-U | CAU=>UAU | H=>Y |
| matK | 1 | 2865 | CDS | - | mRNA | C-to-U | CAU=>UAU | H=>Y |
| ndhB | 9 | 140780 141098 141217 141377 141461 141467 141503 141886 142112 | CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA CCA=>CUA CAU=>UAU UCU=>UUU UCA=>UUA UCA=>UUA UCA=>UUA CAU=>UAU CCA=>CUA | S=>L P=>L H=>Y S=>F S=>L S=>L S=>L H=>Y P=>L |
| ndhD | 5 | 116281 116290 116494 116785 117166 | CDS CDS CDS CDS CDS | - - - - - | mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U | CCC=>CUC UCA=>UUA UCA=>UUA UCA=>UUA ACG=>AUG | P=>L S=>L S=>L S=>L T=>M |
| ndhF | 1 | 112349 | CDS | - | mRNA | C-to-U | UCA=>UUA | S=>L |
| ndhG | 1 | 118858 | CDS | - | mRNA | C-to-U | UCC=>UUC | S=>F |
| petL | 1 | 65717 | CDS | + | mRNA | C-to-U | CCU=>CUU | P=>L |
| psbE | 1 | 64109 | CDS | - | mRNA | C-to-U | CCU=>UCU | P=>S |
| psbF | 1 | 63985 | CDS | - | mRNA | C-to-U | UCU=>UUU | S=>F |
| psbZ | 1 | 35801 | CDS | + | mRNA | C-to-U | UCA=>UUA | S=>L |
| rpl23 | 1 | 152313 | CDS | + | mRNA | C-to-U | UCA=>UUA | S=>L |
| rpoA | 1 | 78691 | CDS | - | mRNA | C-to-U | UCU=>UUU | S=>F |
| rpoB | 3 | 23898 25779 25992 | CDS CDS CDS | - - - | mRNA mRNA mRNA | C-to-U C-to-U C-to-U | UCA=>UUA UCA=>UUA UCU=>UUU | S=>L S=>L S=>L |
| rpoC1 | 1 | 21785 | CDS | - | mRNA | C-to-U | UCA=>UUA | S=>L |
| rps12 | 1 | 69553 | Intron | NA | mRNA | C-to-U | NA=>NA | NA=>NA |
| rps14 | 2 | 37092 37161 | CDS CDS | - - | mRNA mRNA | C-to-U C-to-U | CCA=>CUA UCA=>UUA | P=>L S=>L |
( NA = Data Not Available )
| Gene | Editing Sites | Genomic Position | Region | Strand | RNA | Type | Codons | Amino Acids |
|---|---|---|---|---|---|---|---|---|
| ArthMp062 | 1 | 204112 | NA | + | Unanotated Transcript | C-to-U | NA=>NA | NA=>NA |
| ArthMp086 | 11 | 260647-261006 260655 260660 260753 260757 260795 260796 260858 260924 260938 260943 | CDS NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ArthMp087 | 3 | 260963-261307 260981 260999 | CDS NA NA | - + + | mRNA Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U | NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA |
| ArthMp104 | 1 | 318588-319463 | CDS | - | mRNA | NA | NA=>NA | NA=>NA |
| atp1 | 6 | 302166-303689 302206 302275 302398 302512 302580 | CDS NA NA NA NA NA | - + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| atp6 | 1 | 112224 | CDS | + | mRNA | C-to-U | CCA=>UCA | P=>S |
| atp9 | 4 | 278947 278977 279061 279118 | CDS CDS CDS CDS | + + + + | mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U | UCA=>UUA UCA=>UUA UCA=>UUA CCA=>CUA | S=>L S=>L S=>L P=>L |
| ccb203 | 13 | 256865-257476 257010 257086 257121 257133 257157 257176 257200 257218 257251 257269 257301 257412 | CDS NA NA NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ccb206 | 39 | 30478 30490 30533 30537 30540 30542 30590 30599 30610 30611 30616 30621 30622 30626 30634 30641 30643 30650 30655 30656 30748 30766 30800 30829 30841 30842 30868 30886 30890 30929 30937 30938 30947 30974 30976 31013 31016 31028 31031 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CUU=>UUU CAU=>UAU UCA=>UUA UUC=>UUU CUC=>CUU UCG=>UUG UCA=>UUA UCC=>UUC CCG=>UCG CCG=>CUG CGG=>UGG AUC=>AUU CCU=>UCU CCG=>CUG CCU=>UCU CCU=>CUU CCU=>UCU CCU=>CUU CCU=>UCU CCU=>CUU CGG=>UGG CGU=>UGU UCG=>UUG CGG=>UGG CCA=>UCA CCA=>CUA CUG=>UUG CGU=>UGU UCG=>UUG UCG=>UUG CCA=>UCA CCA=>CUA UCA=>UUA UCU=>UUU CGU=>UGU UCA=>UUA UCG=>UUG UCC=>UUC UCU=>UUU | L=>F H=>Y S=>L F=>F L=>L S=>L S=>L S=>F P=>S P=>L R=>W I=>I P=>S P=>L P=>S P=>L P=>S P=>L P=>S P=>L R=>W R=>C S=>L R=>W P=>S P=>L L=>L R=>C S=>L S=>L P=>S P=>L S=>L S=>F R=>C S=>L S=>L S=>F S=>F |
| ccb256 | 29 | 239988-240758 240086 240103 240109 240135 240140 240141 240145 240151 240184 240191 240211 240238 240262 240282 240286 240292 240296 240301 240313 240338 240359 240364 240428 240497 240575 240580 240626 240656 | CDS NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + + + + + + + + + + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ccb382 | 23 | 231894-233042 232088 232237 232252 232264 232324 232333 232334 232462 232464 232559 232639 232665 232672 232703 232754 232774 232781 232843 232886 232900 232939 232999 | CDS NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + + + + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| ccb452 | 18 | 51293-51871 51325 51372 51406 51437 51480 51727 52832-53611 53197 53206 53278 53437 53452 53457 53466 53490 53509 53562 | CDS NA NA NA NA NA NA CDS NA NA NA NA NA NA NA NA NA NA | - + + + + + + - + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| cob | 7 | 60520 60559 60802 61087 61142 61216 61318 | CDS CDS CDS CDS CDS CDS CDS | + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CUU=>UUU CAU=>UAU CAU=>UAU CAU=>UAU CCA=>CUA CAC=>UAC CCU=>UCU | L=>F H=>Y H=>Y H=>Y P=>L H=>Y P=>S |
| cox2 | 17 | 40502-40585 40543 40564 41930-42628 41931 42048 42072 42153 42250 42351 42368 42376 42491 42558 42602 42604 42605 | CDS NA NA CDS NA NA NA NA NA NA NA NA NA NA NA NA NA | - + + - + + + + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| cox3 | 8 | 218391 218524 218536 218590 218593 218692 218701 218882 | CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | CCA=>UCA CCU=>CUU UCU=>UUU UCU=>UUU UCU=>UUU CCU=>CUU CCU=>CUU UUC=>UUU | P=>S P=>L S=>F S=>F S=>F P=>L P=>L F=>F |
| matR | 10 | 144294-146312 144418 144506 144542 144562 144583 145939 146029 146072 146233 | CDS NA NA NA NA NA NA NA NA NA | - + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad1 | 33 | 143260 143269 143299 143374 143400 143434 143442 143454 143472 143590 144105 219126 219159 219207 219244 219263 287942 287997 288006 288031 288041 288077 288084 288085 288087 314410 314421 318015 318083 318084 318126 318224 318389 | NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad2 | 29 | 327900 327954 327957 329737 329766 329767 329813 329886 329955 330051 330055 330085 330093 330204 330225 79760 79788 79790 79857 79877 79891 79918 79924 79929 79974 79977 81208 81209 81239 | NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad4 | 32 | 161721 161766 161776 161799 161816 161850 161856 161858 161889 162009 162054 162068 162094 162095 162110 162141 163771 163822 163930 163947 163999 164059 167254 167277 167345 167373 167416 167599 167617 169591 169603 169619 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCU=>UUU ACU=>AUU UUC=>UUU CCG=>CUG CUG=>UUG CCU=>CUU CCU=>CUU CGG=>UGG UCU=>UUU UCA=>UUA ACA=>AUA CGU=>UGU UUC=>UUU CGC=>UGC CUA=>UUA CCA=>CUA UCA=>UUA UCU=>UUU CCU=>CUU CAC=>UAC UCU=>UUU UCA=>UUA CCG=>CUG CCU=>UCU UAC=>UAU CUC=>UUC UCA=>UUA UCA=>UUA UCC=>UUC CGG=>UGG CAC=>UAC CCG=>CUG | S=>F T=>I F=>F P=>L L=>L P=>L P=>L R=>W S=>F S=>L T=>I R=>C F=>F R=>C L=>L P=>L S=>L S=>F P=>L H=>Y S=>F S=>L P=>L P=>S Y=>Y L=>F S=>L S=>L S=>F R=>W H=>Y P=>L |
| nad4L | 10 | 188929-189231 189035 189044 189074 189122 189132 189137 189146 189177 189191 | CDS NA NA NA NA NA NA NA NA NA | - + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad5 | 41 | 129794 129825 132032 140895 141295 141335 141406 141445 141457 141494 141541 141561 141562 141572 141617 141622 141676 141772 141796 141812 141928 141949 141961 142139 142844 20623 20652 20663 20665 20686 21975 22005 22065 24685 24693 24749 24801 25004 25075 58526 77332 | NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad6 | 11 | 76642-77259 76814 77069 77091 77099 77157 77165 77171 77172 77207 77234 | CDS NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| nad7 | 31 | 132094 132108 132147 132207 132989 133042 133099 133233 134300 134309 134340 134347 134412 134431 134440 134674 135847 135873 135883 135888 135918 135938 135944 137931 138018 138025 138047 138056 138071 138092 138105 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | AUC=>AUU UCG=>UUG UCA=>UUA UCA=>UUA UAG=>UAU UAG=>UAU UAG=>UAU UCU=>UUU UAG=>UAU GAC=>GAU CAU=>UAU UCA=>UUA CGU=>UGU UCA=>UUA UCA=>UUA UCA=>UUA UCG=>UUG CAU=>UAU UCG=>UUG CUU=>UUU CGC=>UGC AUC=>AUU AUC=>AUU UCC=>UCU CCC=>CCU CGU=>UGU UCU=>UUU UCA=>UUA UCU=>UUU CCA=>CUA GUC=>GUU | I=>I S=>L S=>L S=>L TERM=>Y TERM=>Y TERM=>Y S=>F TERM=>Y D=>D H=>Y S=>L R=>C S=>L S=>L S=>L S=>L H=>Y S=>L L=>F R=>C I=>I I=>I S=>S P=>P R=>C S=>F S=>L S=>F P=>L V=>V |
| nad9 | 8 | 23663-24235 23797 23838 23908 23938 24046 24069 24144 | CDS NA NA NA NA NA NA NA | - + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| orf25 | 9 | 188084-188662 188247 188268 188412 188413 188415 188448 188525 188574 | CDS NA NA NA NA NA NA NA NA | - + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| orfX | 24 | 157549 157634 157635 157651 157654 157663 157690 157851 157854 157867 157869 157897 157899 157902 157930 157964 157995 158028 158071 158133 158155 158183 158190 158236 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + + + + + + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCG=>UUG UUC=>UUU CCG=>UCG UCU=>UUU CCA=>CUA UCA=>UUA UCG=>UUG CUC=>UUC CAU=>UAU UCU=>UUU CGC=>UGC CCU=>CUU CCC=>UCC CGG=>UGG CCA=>CUA CUC=>CUU CAU=>UAU CCA=>UCA CCA=>CUA CCG=>UCG UCC=>UUC AUC=>AUU CGU=>UGU UCG=>UUG | S=>L F=>F P=>S S=>F P=>L S=>L S=>L L=>F H=>Y S=>F R=>C P=>L P=>S R=>W P=>L L=>L H=>Y P=>S P=>L P=>S S=>F I=>I R=>C S=>L |
| rpl16 | 6 | 25076-25615 25104 25110 25176 25387 25407 | CDS NA NA NA NA NA | - + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rpl2 | 1 | 155454 | CDS | + | mRNA | C-to-U | AUC=>AUU | I=>I |
| rpl5 | 10 | 57808 57820 57831 57832 57837 57865 57942 58090 58102 58285 | CDS CDS CDS CDS CDS CDS CDS CDS CDS CDS | + + + + + + + + + + | mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA mRNA | C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | UCA=>UUA CCG=>CUG CCG=>UCG CCG=>CUG CAC=>UAC UCG=>UUG CGC=>UGC UCG=>UUG UCG=>UUG CCA=>CUA | S=>L P=>L P=>S P=>L H=>Y S=>L R=>C S=>L S=>L P=>L |
| rps12 | 9 | 260224-260601 260317 260318 260333 260381 260406 260456 260498 260518 | CDS NA NA NA NA NA NA NA NA | - + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rps3 | 15 | 25482-27077 25555 25573 25582 25619 25683 25801 25809 26266 26550 26638 26966 27027 28659-28733 28670 | CDS NA NA NA NA NA NA NA NA NA NA NA NA CDS NA | - + + + + + + + + + + + + - + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript mRNA Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U NA C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
| rps4 | 16 | 82028-83116 82060 82065 82074 82075 82125 82150 82161 82593 82740 82774 82809 82818 82882 82888 83029 | CDS NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA | - + + + + + + + + + + + + + + + | mRNA Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript Unanotated Transcript | NA C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U C-to-U | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA | NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA NA=>NA |
( NA = Data Not Available )
Last update: Sep 2026
(version 2.0)