Variation Detail
| Variation ID | sbi1627 |
| Type | SNP |
| Position | Chr01 23465-23465 |
| Ref /Alleles | T/ C |
| MAF | C: 0.007 |
| 5' Flank | TCAGCGGCAGCGCCGCCACACAAAGCATGC |
| 3' Flank | TCTGGCTCGGCAACTACGCGACCAGCCAGA |
Individual Alleles
Alleles Distribution
Gene Annotation
| Variation ID | Gene | Consequence | Transcript | Type | cDNA | Source/target codon | Protein Name | protein pos | source/target Amino acid |
| sbi1627 | Sobic.001G000400 | downstream gene variant |MODIFIER | Sobic.001G000400.2 | mRNA | Sobic.001G000400.2.p | ||||
| sbi1627 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.5 | mRNA | Sobic.001G000400.5.p | ||||
| sbi1627 | Sobic.001G000300 | synonymous variant |LOW | Sobic.001G000300.2 | mRNA | 546 | gaA/gaG | Sobic.001G000300.2.p | 182 | E/E |
| sbi1627 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.4 | mRNA | Sobic.001G000400.4.p | ||||
| sbi1627 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.3 | mRNA | Sobic.001G000400.3.p | ||||
| sbi1627 | Sobic.001G000400 | downstream gene variant |MODIFIER | Sobic.001G000400.1 | mRNA | Sobic.001G000400.1.p | ||||
| sbi1627 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.6 | mRNA | Sobic.001G000400.6.p |