Variation Detail
| Variation ID | sbi1716 |
| Type | SNP |
| Position | Chr01 24398-24398 |
| Ref /Alleles | G/ A |
| MAF | A: 0.006 |
| 5' Flank | TTCAGGATTGTTCAGCATTTCGTGATCTTG |
| 3' Flank | GTGTTAGACAAGATGATACTGAATGTTGTT |
Individual Alleles
Alleles Distribution
Gene Annotation
| Variation ID | Gene | Consequence | Transcript | Type | cDNA | Source/target codon | Protein Name | protein pos | source/target Amino acid |
| sbi1716 | Sobic.001G000400 | 3_prime UTR variant |MODIFIER | Sobic.001G000400.2 | mRNA | 4365 | Sobic.001G000400.2.p | |||
| sbi1716 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.5 | mRNA | Sobic.001G000400.5.p | ||||
| sbi1716 | Sobic.001G000300 | upstream gene variant |MODIFIER | Sobic.001G000300.2 | mRNA | Sobic.001G000300.2.p | ||||
| sbi1716 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.4 | mRNA | Sobic.001G000400.4.p | ||||
| sbi1716 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.3 | mRNA | Sobic.001G000400.3.p | ||||
| sbi1716 | Sobic.001G000400 | 3_prime UTR variant |MODIFIER | Sobic.001G000400.1 | mRNA | 4658 | Sobic.001G000400.1.p | |||
| sbi1716 | Sobic.001G000400 | intron variant |MODIFIER | Sobic.001G000400.6 | mRNA | Sobic.001G000400.6.p |