| Gene Symbol | SLC25A44 |
| Description | solute carrier family 25 member 44 |
| Ensembl ID | ENSG00000160785.13 |
| Location | chr1: 156193932 - 156212796 |
| Cytogenetic Region | 1q22 |
| Strand | + |
| Gene Type | protein_coding |
| Also Known As | - |
| Summary | Ubiquitous expression in brain (RPKM 13.3), kidney (RPKM 10.2) and 25 other tissues |
| Links To |
Reported Trait | Mapped Trait | Tissue | Gene Symbol | Ensembl ID | Gene Type | Method/Software | Effect Size | P-value | Publication |
|---|---|---|---|---|---|---|---|---|---|
| Any Migraine | Migraine Disorder | Brain Cortex | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | -6.79E+00 | 1.13E-11 | TWASP000056 |
| Any Migraine | Migraine Disorder | Brain Cortex | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | -6.79E+00 | 1.13E-11 | TWASP000054 |
| Any Migraine | Migraine Disorder | Breast Mammary Tissue | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | 5.99E+00 | 2.06E-09 | TWASP000056 |
| Any Migraine | Migraine Disorder | Breast Mammary Tissue | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | 5.99E+00 | 2.06E-09 | TWASP000054 |
| Any Migraine | Migraine Disorder | Colon Transverse | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | -6.63E+00 | 3.43E-11 | TWASP000054 |
| Any Migraine | Migraine Disorder | Colon Transverse | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | -6.63E+00 | 3.43E-11 | TWASP000056 |
| Stroke | Stroke | Adipose | SLC25A44 | ENSG00000160785.13 | protein-coding | FUSION | 6.21E+00 | 5.46E-10 | TWASP000034 |
| Any Migraine | Migraine Disorder | Nerve Tibial | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | 5.39E+00 | 7.04E-08 | TWASP000056 |
| Any Migraine | Migraine Disorder | Nerve Tibial | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | 5.39E+00 | 7.04E-08 | TWASP000054 |
| Any Migraine | Migraine Disorder | Pancreas | SLC25A44 | ENSG00000160785.13 | protein-coding | Summary-PrediXcan(S-PrediXcan) | -4.95E+00 | 7.61E-07 | TWASP000056 |
Gene Symbol | SNP | Ref Allele | Alt Allele | SNP Location | Effect Size | P-value | Tissue |
|---|---|---|---|---|---|---|---|
| SLC25A44 | rs55910626 | C | G | chr1:156190118 | -0.242642 | 2.52032e-21 | Adipose_Subcutaneous |
| SLC25A44 | rs72712141 | C | T | chr1:156737122 | -0.772683 | 9.88346e-06 | Brain_Anterior_cingulate_cortex_BA24 |
| SLC25A44 | rs115676496 | C | T | chr1:156201443 | -0.919182 | 5.49572e-09 | Brain_Spinal_cord_cervical_c-1 |
| SLC25A44 | rs188978150 | T | C | chr1:155241315 | -1.28325 | 9.84578e-06 | Brain_Substantia_nigra |
| SLC25A44 | rs115676496 | C | T | chr1:156201443 | -0.899486 | 1.05546e-07 | Brain_Substantia_nigra |
| SLC25A44 | rs72712141 | C | T | chr1:156737122 | -1.61181 | 8.27018e-09 | Brain_Substantia_nigra |
| SLC25A44 | rs4661213 | C | T | chr1:156700753 | -0.489399 | 7.31536e-06 | Cells_EBV-transformed_lymphocytes |
| SLC25A44 | rs55675376 | C | T | chr1:156196090 | -0.165247 | 1.50547e-06 | Colon_Sigmoid |
| SLC25A44 | rs6669212 | G | A | chr1:156140522 | -0.212885 | 5.38384e-06 | Esophagus_Gastroesophageal_Junction |
| SLC25A44 | rs146961301 | T | C | chr1:157002988 | -0.505955 | 4.06938e-06 | Esophagus_Mucosa |
