BioCode

Archive Bioinformatics Codes for Open Source Projects

Basic Statistics

7165
Tools:
24214
Users:
6940
Organizations:
145053
Total Download Count:

Most Popular Tools

Mako A graph-based pattern growth approach to detect complex structural variants
Categories Structural variant detectionTool Type: Toolkit
Technologies: JavaDownload Count: 0
WBSA Web Service for Bisulfite Sequencing Data Analysis
Categories DNA methylationTool Type: Pipeline & Protocol
Technologies: Perl, RDownload Count: 0
GIREMI Identify RNA editing sites
Categories RNA editingTool Type: Application
Technologies: C, Perl, RDownload Count: 0
SNP Calling SNP calling pipeline
Categories SNP detectionTool Type: Pipeline & Protocol
Technologies: BASHDownload Count: 0
Dr. Sim Dr.Sim is a general learning-based framework that automatically infers similarity measurement, and can be used to characterize transcriptional profiles for drug discovery with generalized good performance.
Categories Drug repositioningTool Type: Application
Technologies: Python2, Python3Download Count: 67
CandiHap A haplotype analysis toolkit for natural variation study
Categories Variant effect predictionTool Type: Toolkit
Technologies: Perl, Python2, RDownload Count: 15484
MSIsensor-pro MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability
Categories Prognostic biomarker identificationTool Type: Application
Technologies: C++Download Count: 563
NGSPipe Next generation sequencing pipeline
Categories Read alignment, SNP detection, CNV detection, Structural variant detectionTool Type: Pipeline & Protocol
Technologies: BASHDownload Count: 625
LGC Characterization and identification of long non-coding RNAs based on feature relationship
Categories Protein-coding gene predictionTool Type: Toolkit
Technologies: Java, Python2Download Count: 2694
PanGP bacterial pan-genome profile
Categories Genome visualizationTool Type: Application
Technologies: C++Download Count: 3040

Latest Updated Tools

CARMEN: 1.0.0
Date: October 10, 2021
Dr. Sim: 1.0.0
Date: September 20, 2021
CovProfile: 1.0
Date: September 19, 2021
FASTQ基因数据压缩软件: 1.0
Date: September 16, 2021
SAM基因数据压缩软件: 1.0
Date: September 16, 2021
基因组学实时处理与传输系统装置: 1.0
Date: September 16, 2021
基于公钥加密的身份验证软件: 1.0
Date: September 16, 2021
染色质开放性注释与可视化系统: 1.0
Date: September 16, 2021

BioCode

Mako A graph-based pattern growth approach to detect complex structural variants

WBSA Web Service for Bisulfite Sequencing Data Analysis

GIREMI Identify RNA editing sites

SNP Calling SNP calling pipeline

Dr. Sim Dr.Sim is a general learning-based framework that automatically infers similarity measurement, and can be used to characterize transcriptional profiles for drug discovery with generalized good performance.

CandiHap A haplotype analysis toolkit for natural variation study

MSIsensor-pro MSIsensor-pro: Fast, Accurate, and Matched-normal-sample-free Detection of Microsatellite Instability

NGSPipe Next generation sequencing pipeline

LGC Characterization and identification of long non-coding RNAs based on feature relationship

PanGP bacterial pan-genome profile