Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: http://wnt.cc.utexas.edu/~ifmr530/introndata/main.htm
Full name: functional genomics of organellar introns database
Description: FUGOID is a web-based, taxonomically broad organelle intron database that collects and integrates various functional and structural data on organellar (mitochondrial and chloroplast) introns. The main information provided by FUGOID includes intron sequence, subclass, resident ORF, self-splicing capability, host gene, protein factor(s) involved in splicing, mobility, insertion site, twintron, seminal references and taxonomic position of host organism.
Year founded: 2002
Last update:
Version:
Accessibility:
Manual:
Unaccessible
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Country/Region: United States

Classification and Labelling

Data type:
DNA
Data object:
Database category:
Major species:
NA
Keywords:

Contact information

University/Institution: University of Texas at Austin
Address:
City:
Province/State:
Country/Region: United States
Contact name (PI/Team): David L. Herrin
Contact email (PI/Helpdesk): dlherrin@utxvms.cc.utexas.edu

Publications

11752344
FUGOID: functional genomics of organellar introns database. [PMID: 11752344]
Li F, Herrin DL.

FUGOID is a web-based, taxonomically broad organelle intron database that collects and integrates various functional and structural data on organellar (mitochondrial and chloroplast) introns. The main information provided by FUGOID includes intron sequence, subclass, resident ORF, self-splicing capability, host gene, protein factor(s) involved in splicing, mobility, insertion site, twintron, seminal references and taxonomic position of host organism. It is implemented in a relational database management system, allowing sophisticated, user-friendly searching, data entry and revision. Users can access the database by any common web browser using a variety of operating systems. The main page of the database is available at http://wnt.cc.utexas.edu/~ifmr530/introndata/main.htm.

Nucleic Acids Res. 2002:30(1) | 4 Citations (from Europe PMC, 2022-10-01)

Ranking

All databases:
5154/5380 (4.219%)
Gene genome and annotation:
1391/1436 (3.203%)
5154
Total Rank
4
Citations
0.2
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Record metadata

Created on: 2018-02-08
Curated by:
Lin Liu [2022-09-20]
Lin Liu [2022-08-16]
Hao Zhang [2018-03-03]