Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

General information

URL: https://www.rmbreeding.cn
Full name: Rice Functional Genomics & Breeding
Description: Rice Functional Genomic and Breeding (RFGB) toolkit, version 2.0 includes five major modules, which are: Phenotype, Haplotype, SNP & InDel, Restore Sequence, and Germplasm. Their functions are described with the embedded 3K-RG data as example. Four tips of iceberg for user cases of RFGB v2.0 with corresponding technical routes were presented including: 1) exploring favorable donors for higher zinc concentration in milled grains, 2) shortlisting candidate genes for grain length with near isogenic lines, 3) mining favorable haplotypes for seedling vigor traits under paddy direct seeding system, and 4) variations and restore sequence seeking for a leaf rolling QTL region.
Year founded: 2020
Last update: 2021-09-13
Version: 2.0
Accessibility:
Manual:
Unaccessible
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Country/Region: China

Classification & Tag

Data type:
DNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Institute of Crops Sciences, Chinese Academy of Agricultural Sciences
Address:
City: Beijing
Province/State: Beijing
Country/Region: China
Contact name (PI/Team): Tianqing Zheng/Rice Molecular Breeding
Contact email (PI/Helpdesk): ztqtony@126.com

Publications

31336017
Towards a deeper haplotype mining of complex traits in rice with RFGB v2.0. [PMID: 31336017]
Wang CC, Yu H, Huang J, Wang WS, Faruquee M, Zhang F, Zhao XQ, Fu BY, Chen K, Zhang HL, Tai SS, Wei C, McNally KL, Alexandrov N, Gao XY, Li J, Li ZK, Xu JL, Zheng TQ.
Plant Biotechnol J. 2020:18(1) | 42 Citations (from Europe PMC, 2024-04-06)

Ranking

All databases:
955/6000 (84.1%)
Genotype phenotype and variation:
118/852 (86.268%)
955
Total Rank
41
Citations
10.25
z-index

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Record metadata

Created on: 2021-09-13
Curated by:
Yuanyuan Cheng [2024-02-16]
Yuanyuan Cheng [2023-09-22]
Dong Zou [2021-09-14]
Tianqing Zheng [2021-09-13]