Database Commons
Database Commons

a catalog of worldwide biological databases

Database Profile

riboCIRC

General information

URL: http://www.ribocirc.com
Full name: a translatome data-oriented circRNA database
Description: The database was developed which aims to provide: (1) a comprehensive repository of computationally predicted ribosome-associated circRNAs (Ribo-circRNAs); (2) a manually curated collection of experimentally verified translated circRNAs; (3) an evaluation of cross-species conservation of translatable circRNAs; (4) a systematic de novo annotation of putative circRNA-encoded peptides, and (5) a genome browser to visualize the context-specific occupant footprints of circRNAs. Currently the database contains a total of 2,247 computationally predicted translatable circRNAs across 6 different species (Human, Mouse, Rat, C.elegans, Drosophila and Zebrafish) and 216 experimentally verified translated circRNAs.
Year founded: 2021
Last update: 2020-9-16
Version:
Accessibility:
Accessible
Country/Region: China

Classification & Tag

Data type:
RNA
Data object:
Database category:
Major species:
Keywords:

Contact information

University/Institution: Sun Yat-Sen University
Address: State Key Laboratory of Ophthalmology, Zhongshan Ophthalmic Center, Sun Yat-sen University, Guangzhou, China.
City: Guangzhou
Province/State: Guangdong
Country/Region: China
Contact name (PI/Team): Mingzhe Xie
Contact email (PI/Helpdesk): xiemzh6@gmail.com

Publications

Ranking

All databases:
1149/6275 (81.705%)
Gene genome and annotation:
369/1785 (79.384%)
Expression:
213/1213 (82.523%)
1149
Total Rank
27
Citations
9
z-index

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Record metadata

Created on: 2022-04-18
Curated by:
Lina Ma [2022-06-30]
sun yongqing [2022-05-14]
Qianpeng Li [2022-04-18]