Tinca tinca COX3, ND3, ND4L, ND4, ND5, ND6, CYTB, ND1, ND2, COX1, COX2, ATP8, and ATP6 genes, complete sequence; mitochondrial.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Zhang",
first "HuaHao",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Jiujiang University",
div "College of Pharmacy and Life Science",
city "Jiujiang",
country "China",
street "Xunyang district",
email "zhanghuahao_0824@126.com",
postal-code "332000"
}
}
},
cit {
authors {
names std {
{
name name {
last "Huahao",
first "Zhang",
initials "Z."
}
}
},
affil std {
affil "Jiujiang University",
div "College of Pharmacy and Life Science",
city "Jiujiang",
country "China",
street "Xunyang district",
postal-code "332000"
}
},
date std {
year 2024,
month 4,
day 15
}
},
subtype new,
tool "table2asn 1.28.943"
},
data entrys {
seq {
id {
genbank { accession "C_AA001633", version 1}, gi 0670650650016331
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels",data bool TRUE },
{label str "LeaveParenthetical",data bool TRUE},
{label str "SpecifyNuclearProduct",data bool TRUE},
{label str "MaxMods",data int 0},
{label str "FeatureListType",data str "List All Features"},
{label str "MiscFeatRule",data str "Delete"},
{label str "HIVRule",data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods",num 1,
data strs {"isolate" }}}}}},
source {
genome mitochondrion,
org {
taxname "Tinca tinca",
orgname {
gcode 1
}
},
subtype {
{
subtype country,
name "China"
},
{
subtype collection-date,
name "2021-06-07"
}
}
},
molinfo {
biomol genomic
},
pub {
pub {
pmid 38102128,
article {
title {
name "Maternal dominance contributes to subgenome
differentiation in allopolyploid fishes"
},
authors {
names std {
{
name name {
last "Xu",
first "MinRuiXuan",
initials "M."
}
},
{
name name {
last "Liao",
first "ZhenYang",
initials "Z."
}
},
{
name name {
last "R",
first "Jordan",
initials "J."
}
},
{
name name {
last "Du",
first "Kang",
initials "K."
}
},
{
name name {
last "Li",
first "GuoYin",
initials "G."
}
},
{
name name {
last "Chen",
first "ZhiQiang",
initials "Z."
}
},
{
name name {
last "Wang",
first "YingHao",
initials "Y."
}
},
{
name name {
last "Gao",
first "ZhongNan",
initials "Z."
}
},
{
name name {
last "Agarwal",
first "Gaurav",
initials "G."
}
},
{
name name {
last "HC",
first "Kevin",
initials "K."
}
},
{
name name {
last "Shao",
first "Feng",
initials "F."
}
},
{
name name {
last "Pang",
first "Shuai",
initials "S."
}
},
{
name name {
last "E",
first "Adrian",
initials "A."
}
},
{
name name {
last "van",
first "Jozefien",
initials "J."
}
},
{
name name {
last "Lin",
first "HongMin",
initials "H."
}
},
{
name name {
last "J",
first "Scott",
initials "S."
}
},
{
name name {
last "Bird",
first "Kevin",
initials "K."
}
},
{
name name {
last "E",
first "Chad",
initials "C."
}
},
{
name name {
last "Xu",
first "JinGen",
initials "J."
}
},
{
name name {
last "Yu",
first "GuoHua",
initials "G."
}
},
{
name name {
last "Yang",
first "JianYuan",
initials "J."
}
},
{
name name {
last "Dai",
first "SiFa",
initials "S."
}
},
{
name name {
last "Nelson",
first "Andrew",
initials "A."
}
},
{
name name {
last "Braasch",
first "Ingo",
initials "I."
}
},
{
name name {
last "Zhang",
first "XiaoGu",
initials "X."
}
},
{
name name {
last "Schartl",
first "Manfred",
initials "M."
}
},
{
name name {
last "P",
first "Patrick",
initials "P."
}
},
{
name name {
last "Han",
first "MinJin",
initials "M."
}
},
{
name name {
last "Zhang",
first "HuaHao",
initials "H."
}
}
}
},
from journal {
title {
jta "Nature Communations"
},
imp {
date std {
year 2023,
month 12,
day 15
},
volume "14",
issue "1",
pages "8357",
pubstatus ppublish
}
},
ids {
doi "10.1038/s41467-023-43740-y",
pubmed 38102128
}
}
}
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "ALT EMAIL:zhanghuahao_0824@126.com"
}
}
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "Submission Title:mitochondria"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "NOVOPlasty-4.3.1"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2024,
month 4,
day 15
}
},
inst {
repr raw,
mol dna,
length 16612,
topology linear,
seq-data ncbi2na 'F42FC91411581CA28E785141283C711C855FE0B9575D0C79EC73
C937AAC12D1389D34493CC82981901094F4357447473CF7287F1FC799D425320C738245FD10F92
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275E294C0378E25A7970F93F72C00C51FCE8B137387170244EC8255ED96ADCCBDC924B1C7007A8
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C0359A7D7C67DE0A304BD353EB7CA05001DFAE40D42E827381D0415C3CCD75D1D35CBDD1CD7CC7
56F3C1347015015100174B8901191BC0167B49164FFF3C977C51C7CFC5F850A2C809344101E11E
0C0C44ECFE31033C9FC0F61471D5D37D1D7367773B47E3435C83F93CE313139E15C330163FF42C
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1C129155F5F96AF7DD008E73CF825703174C5F065E2570774470D9C4D3F166B7127D6ECB3DFEC1
CCA35518F5C50CD5534180305572C3C15CF018765E2824F3E4A1D34F13507D715D001173CC1CE5
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0DF04A3CFFC9CC4F11748CFD0593DDB4B0144FE5B8EC073A787CF6C1F119C3AA4D3DF7F3797F33
13365628F33C68D317F10201780CFA2CBDFFDCF2C30C125FEFA71BDE538A10335FF8A6412C3C50
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23FC1D5157A75409483DC0F01CDF78CBC4CE38DCB1304ECF33C4F0ECF2C4C4CECF3453C3F37C17
C090B101BDC06C4E09000F084480C3F3F027A80C8F3D57303A5740FFD7E03150728FC3C053FC3B
2C22145378FC0F0A4CD3938C834A84404BAABA57F0E0F3C7E4DE3D73F4E04E1EC03D4FF08CFCC7
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},
annot {
{
data ftable {
{
data gene {
locus "COX3"
},
location int {
from 0,
to 476,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 0,
to 476,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND3"
},
location int {
from 547,
to 895,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 547,
to 895,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND4L"
},
location int {
from 966,
to 1262,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 966,
to 1262,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND4"
},
location int {
from 1256,
to 2636,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 1256,
to 2636,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND5"
},
location int {
from 2850,
to 4686,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 2850,
to 4686,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND6"
},
location int {
from 4682,
to 5203,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 4682,
to 5203,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "CYTB"
},
location int {
from 5277,
to 6417,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 5277,
to 6417,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND1"
},
location int {
from 10363,
to 11337,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 10363,
to 11337,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ND2"
},
location int {
from 11553,
to 12597,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 11553,
to 12597,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "COX1"
},
location int {
from 12986,
to 14539,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 12986,
to 14539,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "COX2"
},
location int {
from 14695,
to 15378,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 14695,
to 15378,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ATP8"
},
location int {
from 15463,
to 15630,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 15463,
to 15630,
strand plus,
id gi 0670650650016331
}
},
{
data gene {
locus "ATP6"
},
location int {
from 15621,
to 16304,
strand plus,
id gi 0670650650016331
}
},
{
data rna {
type mRNA
},
location int {
from 15621,
to 16304,
strand plus,
id gi 0670650650016331
}
}
}
}
}
}
}
}