Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Human/CHN/HLJCDC-0631/2023 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), and ORF7b (ORF7b) genes, complete cds; ORF8 gene, complete sequence; and nucleocapsid phosphoprotein (N) and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "xia",
first "fengyang",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
country "China",
street "40# Youfang Street, Xiangfang District, Harbin City,
Heilongjiang Province, China",
email "3439961544@qq.com",
postal-code "150000"
}
}
},
cit {
authors {
names std {
{
name name {
last "xu",
first "jun",
initials "j."
}
}
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
country "China",
street "40# Youfang Street, Xiangfang District, Harbin City,
Heilongjiang Province, China",
postal-code "150000"
}
},
date std {
year 2023,
month 4,
day 5
}
},
subtype new,
tool "table2asn 1.26.678"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/Human/CHN/HLJCDC-0631/2023"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: 37; Host_sex: Female"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Heilongjiang"
},
{
subtype isolation-source,
name "Oro-pharyngeal swab"
},
{
subtype collection-date,
name "2023-03-22"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CLC v. 20220301"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2023,
month 4,
day 5
}
},
seq-set {
seq {
id {
genbank { accession "C_AA003266", version 1}, gi 0670650650032661
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels",data bool TRUE },
{label str "LeaveParenthetical",data bool TRUE},
{label str "SpecifyNuclearProduct",data bool TRUE},
{label str "MaxMods",data int 0},
{label str "FeatureListType",data str "List All Features"},
{label str "MiscFeatRule",data str "Delete"},
{label str "HIVRule",data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods",num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 29634,
topology linear,
strand ss,
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DC130C229E8FFEB1C7F23D82152D5C7CFBC30671C3BEF3C0B7B83F43FEC38D4FFE8EFC50001040
2FA3A02E2F48BF3DCB9830F91FF833B77497FDF3A17E0A008AB0FD0037CA83FBBF0833E3AF3FC0
333DC24465CF0FC89B8DD5D2AFFDA7F2053EB23F9432B3C13472BF407F1F9FC4C82F3F875EF8F7
DF4AFA127AE7927CF3BABCDF417287FDCF00CC3803A053C48E7B21EE47E15DDD20102EC6F80D7D
1EC800A0DCD01F707F22D414120DCFBC8FD70CF101FB95FF4E0BFF065144FE4DEFCE7E8128220D
241EEF9E3CF7B4CCC3F6453FF67FC2EF3A2EDD71C0F038DDE7F1C3B73923D3FB0F22B0E0B4940D
9D4A901E80CF9E3CC3CC0F148E3FC4A79BCC9FA0F70427E3DC25CBAC3CC3C5ECC8FBF282DC2740
5FF8888CFD0780DCD296B0485FB0EBBE4AD70FBC775FC434CEBF58547CEBBEB45053122CB2C7F7
FE07DC4E45241EFEE85C00B71C3FAF00103BB43F41F43AFC12912BBDF1E2DC1002FDE5FD410FE9
2213E78471E39ED6E351211F88F7E13C453BDFFAEBB4BBCC114A040C7DC14AF9EF7F34ABBC1E44
82D5EF9CF4E48D07C75C7E9BBF3DC4AF70EFFD011B929EFC32A9E0CED041D338BB84C54FAE4ACC
E672F34874870B74DA6A46CBB272D0D4D3E5C473B47EB9200F4BE7C770C1DCF94C5440FF1CF2EF
14480F714BB7385084D2C8FB10EC4FEEB8F41E0E490DFFBE433A4BFFB110F006E7F07A0C9EF810
840045420BFF910B4040FC4011450F033FEBAFF0FFD1033C5235340142422B4FCF82371FF4102E
11F9239E9F4D010CEB8F97EB8CF9E722174FEE4402FC1A5F1EFF945FE7448E038F9D0C47DE47BC
9AB10D1F7AFA17FAE4AE793C40C53F9CE40E9F32BF0EB3E8BC4483BDDCE205003E3E5050FC32E7
3E900F421D1FDF51242E47E801F423BAD0530E4427F0119FBC041F27503FAE43F42EFF038CD7F4
6DF840BE29E0B903E32BE344A487D02FE484CEE1D043C3C89E480D227DE70DF9E71C03B48BBB1F
A10D0022F8FFEE80A9CD37CED7D5D2D245D3AECB7DF93B87CED5E4420081F441E75E53FB4E3A00
911FD76E0AEDFEFD03A4447AFEC110283FF381440D3C7121044FEEDEB07B8EFB0CA0FB41044BF3
8D7F905E0F23D3D0A28BC8C0CFF0834C4D148EF8FCAE1377A4F0E7D2FB013D00203E165D0E2BE5
083F0383774D8DD4207E80B3892CCC03A53AC4FE9CAFF327A7E3E532C3AE10F39FE7B3852F9ECB
EDD0A9EFBDFBA35E7903F8E0861DE252E740A2D03C4F1130181F3A3FBF38837F10FA07B07F8242
B80D0A39C75F48FFBD99C7906316310974757F68E9F3EFA6F91F7E7BFF4899F500D307740088E9
07247750ABBD1FEFE41F9EFBEFEC12FC7445FF9DBE79E97E0957FDDCDFCE7F2DC7DF922CC07FB0
830C38A7FA7F9E80E5BD40054F1FCE3941CFF7F9E931C3EF1873ECC5F10CBB07DF43ED3C7D2B8E
91042D73F781387148FAEBCC7800EA0DE8B0087BBECF112F1F47D21CF149EC741D0F8B1213EBBE
04EF17DF4DC4300FBE38978204ED40F444361AF4D68BEF0D4B0E8143F38E05861871C9B97FB091
09E38B181F3B1D3DBF682232B9BC32F0C9B1F7FF7E7F6EB3DF9CBC472535F1E67D8FBB9B1E790C
FBC1B8B7EC017DFFC6FC776EF003783DF722F5E37DEB70181C0CF33CBFF7BFA07F0FF253A48F50
6B1CF16F8227C009D7E083A05CB0CAFD73D7C4E8FEDF710FE5CE504A0CAFFECCC3C2F0FF5DE9EF
3A52C1FC1FBFEE7E79EFC48303E8D16BA0F9CD90E9FB7ECA7E3BA749C7D3E7DFD21EFE66C66F53
BAD3F0D480704F7DD06E51D4E91CF7852167DC80B81DB0DA27B8D7DBA137DB3E7A114DCA19EE13
4285E5C080D1EF9C4D1819FDF3C40FA89F649BB24AE1D2BFE79312D9C4A3E907303C044853D4B2
4B8433E7F9FB12C2E1048EFD376F87F4AF1CC92233C70F3CE687FC0BF53FA0DF8F134C05D30F00
3F370B4707883033DD0F238224143A23DDC0604E00F3DFF7E91E3047671FB89FCD1C508BBBC8AC
412C7FC0205F9DF7A04C62A43D14FD35DC9E3040FE4787E7F24743F9FF9FB5E1A6C011B734BC6E
5234BF45C07BD34842282F4207F1DD43FF7CFBE690CBBF3047F9F44740202120E3E07F4F0F87DC
FEE7FF25FDEF3D7EFF0F39F3CDFFAF747E07908D30E01FB465C0604E03F7EFF7CE0D3441EC9E4F
D1420ECBF12D3B1D04D0533B2F8E15BB5CF47DCF703ACCF22CA27200D245FC3E0FB9BA38A7AF70
3454F4B136336B0F312FD7BF17FC43C3E5281703EACB7ECB9BEF6F73821FFC8B34E1BDBBEFF23F
4DC060407C0EDE30E855005260391D64F1BFAE8D748F41E92C1483AEA998D0041B69542B7150C3
1E6DFAF459DD1D04E90A085F03D5D8A10A6F50F0450C92D48E140FA71C5822714860F6EBAE1AC0
3808DD2D423ACFDC717281EA5209E87D5CEB9C1021A4D33ABE41E2A25F8311402344FA456435E7
0439E436E7107D7428104F94029F71920A89229A4B425DF76F5D346CB6412F4203D0752924B018
1F75E720E9E90E9AE39E77E7F9E79F848F8149F88900EDEB029410410A501ED1C20379E78A7DC2
09769001B1E51C09310EC1109FDA486EB5204054280FFAA14A070D210A078F1013E9640F910FE5
5499F49BDF683B664FA4E82D117DA81BAF85C44AE5340FA38408D40FD02342D3FE7830933E1931
004F545048970028400820A78E01D097C5922120804901EE1DF7D79E48FE8E3F75010F90435389
6E78741D29701D39214442923A9CCC06FF67FD6FC63332DC77EE48383DDB07132442C8ECBC1FC3
744C90DFC34BBB04F2A287E02250'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
location int {
from 210,
to 21490,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21498,
to 25307,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 25316,
to 26143,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 26168,
to 26395,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 26446,
to 27114,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 27125,
to 27310,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 27317,
to 27682,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27679,
to 27810,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 16
}
}
},
{
data gene {
locus "ORF8"
},
location int {
from 27817,
to 28182,
strand plus,
id gi 0670650650032661
}
},
{
id local id 19,
data gene {
locus "N"
},
location int {
from 28197,
to 29447,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "ORF10"
},
location int {
from 29472,
to 29588,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 20
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 13411,
to 13438,
strand plus,
id gi 0670650650032661
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 13423,
to 13477,
strand plus,
id gi 0670650650032661
}
},
{
data imp {
key "misc_feature"
},
comment "similar to ORF8 protein",
location int {
from 27817,
to 28182,
strand plus,
id gi 0670650650032661
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29523,
to 29558,
strand plus,
id gi 0670650650032661
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29543,
to 29571,
strand plus,
id gi 0670650650032661
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15458", version 1}, gi 067065065065154581
},
descr {
title "ORF1ab polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 7093,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLRD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
HEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHSTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGVDNLACEDLKSVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTL
VFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAA
VITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCY
DTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYR
SLPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFI
VLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFN
GVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGS
DVLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRK
SNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGS
FLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDR
WFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD
VVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFL
CLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTL
VYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFG
LFCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLL
SVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSL
PSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAM
QTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSK
IVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTIKGGRFVLALL
SDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPAN
STVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKG
FCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTS
TDVVYRAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFR
IDGDMVPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVR
QALLKTVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDL
TKPYIKWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVP
FVVSTGYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNK
DFYDFAVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIV
NNLDKSAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQ
KLLKSIAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHR
FYRLANECAQVLSEMVMCGSSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYE
CLYRNRDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTK
GPHEFCSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYL
QYIRKLHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCY
DHVIPTSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAI
ATCDWTNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRV
TKNSKVQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSN
VANYQKVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECF
DKFKVNSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEY
FNSVCRLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREF
LTRNPAWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMS
DRDLYDKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRL
ISMMGFKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTD
FSRVSAKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLC
DRRATCFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVK
RVDWTIEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEEL
FYSYATHSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPF
FYYSDSPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNT
FTRLQSLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILN
NLGVDIAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGL
QPSVGPKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEG
YAFEHIVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIK
SQDLSVVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKG
IMMNVAKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCAT
VHTANKWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVT
NVNASSSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILS
LLSKGRLIIRENNRVVISSDVLVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
location int {
from 0,
to 7092,
id gi 067065065065154581
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3262,
id gi 067065065065154581
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3263,
to 3568,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3569,
to 3855,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3856,
to 3938,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3939,
to 4136,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4137,
to 4249,
id gi 067065065065154581
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4250,
to 4388,
id gi 067065065065154581
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4389,
to 5320,
id gi 067065065065154581
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5321,
to 5921,
id gi 067065065065154581
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5922,
to 6448,
id gi 067065065065154581
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6449,
to 6794,
id gi 067065065065154581
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6795,
to 7092,
id gi 067065065065154581
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15461", version 1}, gi 067065065065154611
},
descr {
title "ORF1a polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 4402,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLRD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKN
GNKGAGGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDL
LARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIK
TIQPRVEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYL
PQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGV
VGEGSEGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKA
KKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNN
LVVMAYITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIK
ESVQTFFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTE
VLTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDD
TVIEVQGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYY
LFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDS
QQTVGQQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAAN
VYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQ
HEVLLAPLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITES
KPSVEQRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVL
TAVVIPTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWN
LREMLAHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGY
VTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKR
GDKSVYYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIK
PHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQI
ELKFNPPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKG
VEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHSTFTCASEYTGNYQCGHYKHITSK
ETLYCIDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPY
PNASFDNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNAT
NKATYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGVDNLACEDLKSVSEEVVENPTIQKDVLECNVKTTEVVGDII
LKPANNSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTT
NIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIW
FLLLSVCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQIT
ISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFA
SFYYVWKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFIS
DEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFD
GKSKCEESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAK
NVSLDNVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHIN
AQVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTL
VFLFVAAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAA
VITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCY
DTNVLEGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYR
SLPGVFCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFI
VLCLTPVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFN
GVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGS
DVLYQPPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRK
SNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGS
FLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDR
WFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFD
VVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFL
CLFLLPSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTL
VYKVYYGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFG
LFCLLNRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLL
SVLQQLRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSL
PSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAM
QTMLFTMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSK
IVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTIKGGRFVLALL
SDLQDLKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPAN
STVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKG
FCDLKGKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
location int {
from 0,
to 4401,
id gi 067065065065154611
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 179,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 180,
to 817,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 818,
to 2762,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2763,
to 3262,
id gi 067065065065154611
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3263,
to 3568,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3569,
to 3855,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3856,
to 3938,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3939,
to 4136,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4137,
to 4249,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4250,
to 4388,
id gi 067065065065154611
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4389,
to 4401,
id gi 067065065065154611
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15462", version 1}, gi 067065065065154621
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1269,
seq-data iupacaa "MFVFLVLLPLVSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHST
QDLFLPFFSNVTWFHAIHVSGTNGTKRFDNPALPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIK
VCEFQFCNDPFLDVYQKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKEGNFKNLREFVFKNIDGYFKIYSKHT
PINLERDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPVDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTIT
DAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFHEVFNATTFASVYAWNRKRISNCVAD
YSVIYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLD
SKPSGNYNYLYRLFRKSKLKPFERDISTEIYQAGNRPCNGVAGPNCYSPLQSYGFRPTYGVGHQPYRVVVLSFELLHA
PATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVI
TPGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQT
QTKSHRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLL
QYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAG
FIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIG
VTQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVT
YVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPE
LDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIA
GLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1268,
id gi 067065065065154621
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15463", version 1}, gi 067065065065154631
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065065154631
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15464", version 1}, gi 067065065065154641
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGALIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065065154641
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15465", version 1}, gi 067065065065154651
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MADSNGTITVEELKKLLEEWNLVIGFLFLTWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065065154651
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15466", version 1}, gi 067065065065154661
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEIL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065065154661
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15467", version 1}, gi 067065065065154671
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065065154671
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15468", version 1}, gi 067065065065154681
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLAFLLFLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065065154681
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15459", version 1}, gi 067065065065154591
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGSSDSTGSNQNGGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065065154591
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA15460", version 1}, gi 067065065065154601
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065065154601
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
except TRUE,
product whole gi 067065065065154581,
location mix {
int {
from 210,
to 13403,
strand plus,
id gi 0670650650032661
},
int {
from 13403,
to 21490,
strand plus,
id gi 0670650650032661
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154611,
location int {
from 210,
to 13418,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154621,
location int {
from 21498,
to 25307,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154631,
location int {
from 25316,
to 26143,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154641,
location int {
from 26168,
to 26395,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154651,
location int {
from 26446,
to 27114,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154661,
location int {
from 27125,
to 27310,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154671,
location int {
from 27317,
to 27682,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154681,
location int {
from 27679,
to 27810,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154591,
location int {
from 28197,
to 29447,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065154601,
location int {
from 29472,
to 29588,
strand plus,
id gi 0670650650032661
},
xref {
{
id local id 21
}
}
}
}
}
}
}
}
}