Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Human/CHN/HLJCDC-0910/2023 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "xia",
first "fengyang",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
country "China",
street "40# Youfang Street, Xiangfang District",
email "3439961544@qq.com",
postal-code "150000"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xu",
first "Jun",
initials "J."
}
}
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
sub "Heilongjiang",
country "China",
street "40# Youfang Street, Xiangfang District",
postal-code "150000"
}
},
date std {
year 2023,
month 4,
day 20
}
},
subtype new,
tool "table2asn 1.26.678"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/Human/CHN/HLJCDC-0910/2023"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: 24; Host_sex: Female"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Heilongjiang"
},
{
subtype isolation-source,
name "oronasopharynx"
},
{
subtype collection-date,
name "2023-04-12"
}
}
},
user {
type str "StructuredComment",
data {
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label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CLC Genomics Workbench v. 22.0.1"
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{
label str "Sequencing Technology",
data str "Illumina"
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{
label str "Sequencing Technology",
data str "MGI"
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{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2023,
month 4,
day 20
}
},
seq-set {
seq {
id {
genbank { accession "C_AA011407", version 1}, gi 0670650650114071
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
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{label str "SpecifyNuclearProduct",data bool TRUE},
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{label str "FeatureListType",data str "List All Features"},
{label str "MiscFeatRule",data str "Delete"},
{label str "HIVRule",data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods",num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
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inst {
repr raw,
mol rna,
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848842144848811884881288822888121182181844888224122212881844848844821221122181
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884844841882112841184214211828888488421181844214888884812121188111124842888112
844118142848841121141211111212221141148888842121148211121118881211112122122118
811181888844844888811888882121118188122141822182111122114211414482188818841141
828128888211211148412128842141842844288218211121181844841884228844841818842842
814141228218884842121111488811244228812848888422122888428212141841118418842821
181212882842128488142444812118212882844884412288844842144842842188121118122188
842818421118442881814488811844818844148812121411848828281841411221111188418842
211221188811814842818844211118821141282128882882212142114842128844111128821141
848448211221811842121142888111212428848811121128814282211188844842118882114848
888111841818228882124828841211148841442841148421118841814488418212144214128821
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118482141484848128844121182111114148841888884844111444281821828818482288222821
482142122821844848148288288421848412881848222842121141111411288212112842822842
218884821841844111142121288822824841144848288848882111844212121284488848112121
114411888881841122121118218812812141211212188848482844811284841848848118144118
848211211212148881841822888421122841188141882188211441441488141811181888811411
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111184422184481218884428144888818142844288418842218148118448412118818428884284
818412214884284814884828211444284884882884844182284284211188841841141241282841
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128481128884114211448411182114418428128228821418888488242428128421124181224181
211422821282228882441844288188488442488421288288428488888214142428822111182181
128282111114141844211281421282822114448488212888488842112884284884884888481121
488812821212288884282488428428442288411422228888282818288818428881482812882884
214148181112888481141181181184144288844288842844111842248822111112221881288818
418422112818888288842844218128118848812412818848181228812118148481128828821188
482188128821448418442121121148228188828411218412812214188448448818128411111844
411828441481111412848488481881212148812882128821412818812214284812821128211884
148121412188448488411218488122882882182812118111188488418414228411411218482211
188212121182412448821822441488488118221481184411221188818418411224124124128128
142484228884811421211428418414812411288184812821882488824411414181448124881181
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848424812842842118188488112484148288481111228828888812488812828248488111118284
118828828141488228418288284482811124112811181881818814888882848884411288811888
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488822818822881218441888482882812118884228184221121441181448888848181811881148
811888822828442848818442214811288811288488884842884284284888121411811188441821
224484411884281824211844288482884814428841848442821428128821884288288821412848
884242481242488221848448218821182214111281121882882821124842212822184421281882
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182814412428484121821144128842281114111821284884281218212411242888288188121118
844414288242142484814214484128214488884284218121482428121441884421128181118811
121214122188221481421484121181884288842884812148114841211214184888218282488412
888214488128181421414181881881188188184144128888111488822188844118288418812182
181112282181188111118881828114821281128414118111818828211881418411414211221184
414188418811124112184111188188288882884421284181121282428128848414288818212812
211414848488141448121121481288881111411228842828828441121818414442118821221888
218228281428418112111888421284128842888142128211888428888428848228412442481111
212482818214881248422141821488821228111284882182141211414411488211411288812828
221188888288188488424421181484888181121288842882121282111141114121411841884112
888218811884128828188848428888814228882848818822884888811881842881881828888448
828212884112842114182181184111288482124228111841121841118882884888828814411821
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248482281882128828188281118448181881414814414281411118214212288811884118848424
844184144284488281118212221882148121824181824481188181214888228488812288881211
881188422144112281118844481482884814842488488248828184114128888814148182184124
882484884888814188821828111241121112881118482841811844122221111821424111842128
224218812488844844422282141882112844214811221411844844442424182111121124824422
221144888122211811812842482884488212242828212821121844211441141228811188222824
144121144248822118811212211814214822141841221118844281281224114142812214124118
824844844841244811118411141828214822114184481888281281228144112844422141142844
128822281844842811211141244218218184448842112841444142288411812122111141821218
844212224211822842811211842842118248428121128822821144112112188422111144288281
242141144414214144244214821142282882824882282182124814824211214882114111882112
822144214214811124112882822842814118442844211844244841842842828842888428428428
841214188411221428841414211118482844811144221121111121144221112848212811411182
842842841442882811411422824421111124812842212811142181211848112121142888244214
124844822141121112221144111888844441221441128118214121144112841881211121884422
421118842121188842222214242882142488288244118482424218844218441148212122882444
112484488412281212144842218211188441841211141822111888811141821148218888428411
811421818841242181211112188222122112141422811111441211111411411442841841112821
142288122421414121411411121421112848412828828822842842141888441841888282211121
188421121182218414224842841282112821442281112821842141221212114421418444281818
111248888242888822488812418181814828128288484214118411882824811281218142121148
141848148811288811828212181421182888118214848481121881444144128841114142212212
188882122812148411211842814441414284228181844114142228118484811118811888814814
8428182222184841888811'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
partial TRUE,
location int {
from 325,
to 21542,
strand plus,
id gi 0670650650114071,
fuzz-from lim lt
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21550,
to 25356,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 25365,
to 26192,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 26217,
to 26444,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 26495,
to 27163,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 27174,
to 27359,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 27366,
to 27731,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27728,
to 27859,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 16
}
}
},
{
id local id 19,
data gene {
locus "ORF8"
},
location int {
from 27866,
to 28231,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "N"
},
location int {
from 28246,
to 29496,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 20
}
}
},
{
id local id 23,
data gene {
locus "ORF10"
},
location int {
from 29521,
to 29637,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 22
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 13463,
to 13490,
strand plus,
id gi 0670650650114071
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 13475,
to 13529,
strand plus,
id gi 0670650650114071
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29572,
to 29607,
strand plus,
id gi 0670650650114071
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29592,
to 29620,
strand plus,
id gi 0670650650114071
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' stem-loop II-like motif (s2m)",
location int {
from 29691,
to 29705,
strand plus,
id gi 0670650650114071
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98009", version 1}, gi 067065065065980091
},
descr {
title "ORF1ab polyprotein, partial [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-left
}
},
inst {
repr raw,
mol aa,
length 7072,
seq-data iupacaa "QVRDVLVRGFGDSVEEVLSEARQHLKDCTCGLVEVEKGVLPQLEQPYV
FIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHRYGADLKSFDLGD
ELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTK
RGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSV
YPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPE
HSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKV
NINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFA
SEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTN
IFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCADSI
IIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTS
EAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNIIFELDERI
DKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSFYPP
DEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTI
VEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAM
QVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHS
LRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEV
TTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKASGTTEMLAKAL
RKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVET
KAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPA
TVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVI
TFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRV
EAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEA
ANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQI
PCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI
TDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDL
NQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKPV
ETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMA
AYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTL
LLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVL
MSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAY
ILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTC
MMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQS
SYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLM
CQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVD
SDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSL
SEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKH
TDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTT
NGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDTRYV
LMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLFTNMFTP
LIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLTPVYSFLPGVYSVIYLY
LTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEM
YLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQISITSAVLQSGFR
KMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSM
QNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGSCGSVGFNIDYDCVSFC
YMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYN
YEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTIKGT
HHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIVMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVYMPA
SWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALII
SVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDYLVS
TQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQL
HNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVANGD
SEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIIN
NARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIV
TALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIY
TELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYKDYL
ASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVG
FTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGFAKF
LKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYTMAD
LVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGIVGV
LTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEERLKL
FDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQDVN
LHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSVELK
HFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKARLYY
DSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGTSKF
YGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMCGGS
LYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYAYLR
KHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDDYVY
LPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMYSVM
LTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVISTSHKLVLSVNPYVCNA
PGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCNERL
KLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDYGDA
VVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGPPGT
GKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVNALP
ETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLGTCR
RCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNSQNA
VASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRRNVA
TLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRLISMMGFKMNYQVNGYPNMFIT
REEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLIPLM
YKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWHHSI
GFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKINAAC
RKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLFWNC
NVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSDIDY
VPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKGHFD
GQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRDAPA
HISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIGEAV
KTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGGLHL
LIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYTEIS
FMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTLTLA
VPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPKTKN
VTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLGKPR
EQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVISSDV
LVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
partial TRUE,
location int {
from 0,
to 7071,
id gi 067065065065980091,
fuzz-from lim lt
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
partial TRUE,
location int {
from 0,
to 158,
id gi 067065065065980091,
fuzz-from lim lt
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 159,
to 796,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 797,
to 2741,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2742,
to 3241,
id gi 067065065065980091
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3242,
to 3547,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3548,
to 3834,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3835,
to 3917,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3918,
to 4115,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4116,
to 4228,
id gi 067065065065980091
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4229,
to 4367,
id gi 067065065065980091
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4368,
to 5299,
id gi 067065065065980091
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5300,
to 5900,
id gi 067065065065980091
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5901,
to 6427,
id gi 067065065065980091
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6428,
to 6773,
id gi 067065065065980091
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6774,
to 7071,
id gi 067065065065980091
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98013", version 1}, gi 067065065065980131
},
descr {
title "ORF1a polyprotein, partial [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-left
}
},
inst {
repr raw,
mol aa,
length 4381,
seq-data iupacaa "QVRDVLVRGFGDSVEEVLSEARQHLKDCTCGLVEVEKGVLPQLEQPYV
FIKRSDARTAPHGHVMVELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHRYGADLKSFDLGD
ELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFIDTK
RGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIRSV
YPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEVGPE
HSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQKEKV
NINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFA
SEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQWLTN
IFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCADSI
IIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQPTS
EAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNIIFELDERI
DKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSFYPP
DEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTIQTI
VEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATNNAM
QVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADPIHS
LRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEV
TTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKASGTTEMLAKAL
RKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVET
KAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLKVPA
TVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVI
TFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDTLRV
EAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARAGEA
ANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQI
PCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYKGPI
TDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDL
NQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWSTKPV
ETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMA
AYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYFFTL
LLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALGVL
MSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWFLAY
ILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNSSTC
MMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQS
SYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYSQLM
CQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVD
SDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDFMSL
SEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKH
TDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTILRTT
NGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDTRYV
LMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLFTNMFTP
LIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLTPVYSFLPGVYSVIYLY
LTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEM
YLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQISITSAVLQSGFR
KMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSM
QNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGSCGSVGFNIDYDCVSFC
YMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYN
YEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTIKGT
HHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIVMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVYMPA
SWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALII
SVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDYLVS
TQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQL
HNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVANGD
SEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIIN
NARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWPLIV
TALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTGTIY
TELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYKDYL
ASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCANDPVG
FTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
partial TRUE,
location int {
from 0,
to 4380,
id gi 067065065065980131,
fuzz-from lim lt
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
partial TRUE,
location int {
from 0,
to 158,
id gi 067065065065980131,
fuzz-from lim lt
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 159,
to 796,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 797,
to 2741,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2742,
to 3241,
id gi 067065065065980131
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3242,
to 3547,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3548,
to 3834,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3835,
to 3917,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3918,
to 4115,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4116,
to 4228,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4229,
to 4367,
id gi 067065065065980131
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4368,
to 4380,
id gi 067065065065980131
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98014", version 1}, gi 067065065065980141
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1268,
seq-data iupacaa "MFVFLVLLPLVSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHST
QDLFLPFFSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVC
EFQFCNDPFLDVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTP
INLGRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITD
AVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATRFASVYAWNRKRISNCVADY
SVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDS
KVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAP
ATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVIT
PGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQ
TKSHRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQ
YGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGF
IKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGV
TQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVEA
EVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTY
VPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL
DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAG
LIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1267,
id gi 067065065065980141
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98015", version 1}, gi 067065065065980151
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065065980151
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98016", version 1}, gi 067065065065980161
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065065980161
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98017", version 1}, gi 067065065065980171
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MANSNGTITVEELKKLLEEWNLVIGFLFLTWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065065980171
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98018", version 1}, gi 067065065065980181
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEID"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065065980181
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98019", version 1}, gi 067065065065980191
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065065980191
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98020", version 1}, gi 067065065065980201
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLAFLLFLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065065980201
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98010", version 1}, gi 067065065065980101
},
descr {
title "ORF8 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIR
VGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDFI"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF8 protein"
}
},
location int {
from 0,
to 120,
id gi 067065065065980101
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98011", version 1}, gi 067065065065980111
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGPSDSTGSNQNGGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNQLESKMSGKGQQKQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065065980111
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98012", version 1}, gi 067065065065980121
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065065980121
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
partial TRUE,
except TRUE,
product whole gi 067065065065980091,
location mix {
int {
from 325,
to 13455,
strand plus,
id gi 0670650650114071,
fuzz-from lim lt
},
int {
from 13455,
to 21542,
strand plus,
id gi 0670650650114071
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame one,
code {
id 1
}
},
partial TRUE,
product whole gi 067065065065980131,
location int {
from 325,
to 13470,
strand plus,
id gi 0670650650114071,
fuzz-from lim lt
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980141,
location int {
from 21550,
to 25356,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980151,
location int {
from 25365,
to 26192,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980161,
location int {
from 26217,
to 26444,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980171,
location int {
from 26495,
to 27163,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980181,
location int {
from 27174,
to 27359,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980191,
location int {
from 27366,
to 27731,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980201,
location int {
from 27728,
to 27859,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980101,
location int {
from 27866,
to 28231,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980111,
location int {
from 28246,
to 29496,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 21
}
}
},
{
id local id 22,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065980121,
location int {
from 29521,
to 29637,
strand plus,
id gi 0670650650114071
},
xref {
{
id local id 23
}
}
}
}
}
}
}
}
}