Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/Human/CHN/HLJCDC-0943/2023 ORF1ab polyprotein (ORF1ab), ORF1a polyprotein (ORF1ab), surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "xia",
first "fengyang",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
country "China",
street "40# Youfang Street, Xiangfang District",
email "3439961544@qq.com",
postal-code "150000"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xu",
first "Jun",
initials "J."
}
}
},
affil std {
affil "Department for Viral Disease Control and Prevention,
Heilongjiang Provincial Center for Disease Control and Prevention",
div "Institute for Viral Disease Control and Prevention",
city "Harbin",
sub "Heilongjiang",
country "China",
street "40# Youfang Street, Xiangfang District",
postal-code "150000"
}
},
date std {
year 2023,
month 4,
day 20
}
},
subtype new,
tool "table2asn 1.26.678"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/Human/CHN/HLJCDC-0943/2023"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: 80; Host_sex: Female"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Heilongjiang"
},
{
subtype isolation-source,
name "oronasopharynx"
},
{
subtype collection-date,
name "2023-04-15"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CLC Genomics Workbench v. 22.0.1"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "Sequencing Technology",
data str "MGI"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2023,
month 4,
day 20
}
},
seq-set {
seq {
id {
genbank { accession "C_AA011437", version 1}, gi 0670650650114371
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels",data bool TRUE },
{label str "LeaveParenthetical",data bool TRUE},
{label str "SpecifyNuclearProduct",data bool TRUE},
{label str "MaxMods",data int 0},
{label str "FeatureListType",data str "List All Features"},
{label str "MiscFeatRule",data str "Delete"},
{label str "HIVRule",data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods",num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 29735,
topology linear,
strand ss,
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5D2FF13D074A1FBDF17F7FD43BC7EBD4E7377A850EB1C22BF8C15ED714FC38EBBF3FE7D47882DC
130C229E8FFEB1C7F23D82152D5C7CFBC30671C3BEF3C0B7B83F43FEC38D4FFE8EFCF144004100
BE8E80B8BD22FCF72E60C3E47FE0CEDDD25FF7CE85F828012AC3F400DF2A0FEEFC20CF8EBCFF00
CCF70911973C3F2A6E37574ABFF69FC814FAC8FE50CACF04D1CAFD01FC7E7F1320BCFE1D7AE3DF
7D2BE849EB9E49F3CEEAF37D05CA1FF73C0330E00E814F1239EC87B91F8577748040BB1BE035F4
7B20028373407DC1FC8B505048373EF23F5C33C407EE57FE382FFC194513F937BF39FA04A08834
907BBE78F3DED7330FD914FFD9FF0BBCE8BB75C703C0E3779FC70EDCE48F4FEC3C8AC382D25036
752A407A033E78F30F303C5238FF129E6F327E83DC109F8F70AFAEB0F30F16B323EFCA0B70DD01
7FE22233F41E03734A5AC1017EC3AEF92BBC3EF1FD7F10D33AFD6151F3AEFAD1414C48B2CB1FDF
F81F713914907BFBA17002DC70FEBC0040EED0FD07D0EBF04A44AEF7C78B70400BF797F5043FA4
884F9E11C78E7B5B8D44847E23DF84F114EF7FEBAED2EF3045281031F7052BE7BDFCD2AEF07912
0B57BE73D392341F1D71FA6EFCF712BDC3BFF4046E4A7BF0CAA7833B41074CE2EE13153EB92B33
99CBCD21D21C2DD369A91B2EC9CB43534F9711CED1FAE4803D2F9F1DC30773E5315103FC73CBBC
51203DC52EDCE142134B23EC43B13FBAE3D078392437FEF90CE92FFEC443C01B9FC1E8327BE042
100115082FFE442D0103F10045143C0CFFAEBFC3FF440CF148D4D0050908AD3F3E08DC7FD040B8
47E48E7A7D340433AE3E5FAE33E79C885D3FB9100BF0697C7BFE517F9D12380E3E74311F791EF2
6AC4347DEBE85FEB92B9E4F10314FE73903A7CCAFC3ACFA2F1120EF773881400F8F94143F0CB9C
FA403D08747F7D4490B91FA007D08EEB414C39109FC0467EF0107C9D40FEB90FD0BBFC0E335FD1
B7E102F8A782E40F8CAF8D12921F40BF92133B87410F0F2279203489F79C37E79C700ED22EEC7E
8434008BE3FFBA02A734DF3B5F574B49174EBB2DF7E4EE1F3B5791080207D1079D794FED38E802
447F5DB82BB7FBF40E9111EBFB0440A0FFCE051034F1C484113FBB7AC1EE3BEC3283ED04112FCE
35FE41783C8F4F428A2F23033FC20D3134523BE3F2B84DDE93C39F4BEC04F40080F8597438AF94
20FC0E0DDD36375081FA02CE24B3300E94EB13FA72BFCC9E9F8F94CB0EB843CE7F9ECE14BE7B2F
F742A7BEF7EE8D79E40FE3821877894B9D028B40F13C44C0607CE8FEFCE20DF443E81EC1FE090A
E03428E71D7D23FEF6671E418C58C425D1D5FDA3A7CFBE9BE47DF9EFFD2267D4034C1DD00223A4
1C91DD42AEF47FBF907E7BEFBFB04BF1D117FE76F9E7A5F8255FF7737F39FCB71F7E48B301FEC2
0C30E29FE9FE7A0396F500153C7F38E5073FDFE7A4C70FBC61CFB317C432EC1F7D0FB4F1F4AE3A
4410B5CFDE04E1C523EBAF31E003A837A2C021EEFB3C44BC7D1F4873C527B1D0743E2C484FAEF8
13BC5F7D3710C03EF8E25E0813B503D110D86BD35A2FBC352C3A050FCE38161861C726E5FEC244
278E2C607CEC74F6FDA088CAC6F0CBC326C7DFFDF9FDBACF7E72F11C94D7C799F63EEE6C79E433
EF06E2DFB005F7FF1BF1DDBBC00DE0F7DC8BD78DF7ADC0607033CCF2FFDEFE81FC3FC94E903D41
AC73C5BE089F00275F820E8172C32BF5CF5F13A3FB7DC43F9739412832BFFB330F0BC3FD77A7BC
E94B07F07EFFB9F9E7BF120C0FA345AE83E73643A7EDFB29F8EE9D271F4F9F7F487BF99B19BD4E
EB4F435201C13DF741B94753A473DE14859F7202E076C3689EE35F6E84DF6CF9E845372867B84D
0A1797020347BE71B46067F7CF103EA27D926EC92B874AFF9E4C4B67128FA41CC0F011214F52C9
2E10CF9FE7EC4B0B84123BF4DDBE1FD2BC732488CF1C3CF38A1FF02FD4FE837E3C4D30174C3C00
FCDC2D1C1E20C0CF743C8E089050E88F8F01813803CF7FDFA478C11D9C7EE27F3471422EEF22B1
04B1FF00817E77DE81318A90F453FCD77278C103F91E1F9FC91D0FE7FE7ED7869B0046DCD2F1B9
48D2FD1701EF4D2108A0BD081FC7750FFDF3EF9A432EFCC11FE7D11D008084838F81FD3C3E1F73
FB9FFC97F7BCF5FBFC3CE7CF37FEBDD1F81E4234C3807ED1970381380FDFBFDF2834D107B2793F
45083B2FC4B4EC7413414CECBE3856ED73D1F73DC0EB33C8B289C8034917F0F83EE6E8E29EBDC0
D153D2C4D8CDAC3CC4BF5EFC5FF10F0F94A05C0FAB2DFB2E6FBDBDCE087FF22CD386F6EFBFC8FD
37018101F03B78C3A154034980E47593C6FEBA95D23D07A4B0520FFAA66340106DA550AFC5430C
79B7EBD167747413A428217C0F57628429BD43C114324B5238503E9C716089C52183DBAEB86B00
E02374B508EB3F71C5CA07A94827A1F573AE704086934CEAF9078A897E0C45008D13E91590D79C
10E790DB9C41F5D0A0413E500A7DC6482A248A692D0977DDBD74D1B2D904BD080F41D4A492C060
7DD79C83A7A43A6B8E79DF9FE79E7E123E0527E22403B7AC0A50410429407B47080DE79E29F708
25DA4006C7947024C43B04427F6921BAD4810150A03FEA85281C3484281E3C404FA5903E443F95
5267D26F7DA0ED993E93A0B445F6A06EBE17112B94D03E8E1023503F408D0B4FF9E0C24CF864C4
013D5141225C00A10020829E3807425F16488482012407B877DF5E7923FA38FDD4043E410D4E25
B9E1D074A5C074E485110A48EA73301BFD9FF5BF18CCCB71DFB920E0F76C3C4C910B23B2F07F0D
D132437F0D2EEC13CA8A1F80894513FD1712E0439CA889E5CCE822570EEC03C3FCB2E73553B8FC
'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
location int {
from 227,
to 21492,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21500,
to 25306,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 25315,
to 26142,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 26167,
to 26394,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 26445,
to 27113,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 27124,
to 27309,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 27316,
to 27681,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27678,
to 27809,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 16
}
}
},
{
id local id 19,
data gene {
locus "ORF8"
},
location int {
from 27816,
to 28181,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "N"
},
location int {
from 28196,
to 29446,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 20
}
}
},
{
id local id 23,
data gene {
locus "ORF10"
},
location int {
from 29471,
to 29587,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 22
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 13413,
to 13440,
strand plus,
id gi 0670650650114371
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 13425,
to 13479,
strand plus,
id gi 0670650650114371
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29522,
to 29557,
strand plus,
id gi 0670650650114371
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29542,
to 29570,
strand plus,
id gi 0670650650114371
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' stem-loop II-like motif (s2m)",
location int {
from 29641,
to 29655,
strand plus,
id gi 0670650650114371
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98368", version 1}, gi 067065065065983681
},
descr {
title "ORF1ab polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 7088,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGA
GGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAG
KASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFLFPLNSIIKTIQPR
VEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAV
VKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGS
EGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAW
NIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMA
YITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQT
FFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEE
VVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEV
QGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDES
GEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVG
QQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKH
GGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLL
APLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVE
QRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVI
PTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREML
AHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGL
NLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSV
YYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSH
EGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFN
PPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVM
YMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYC
IDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASF
DNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATY
KPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPAN
NSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTR
CLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLS
VCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFK
WDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYV
WKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVAR
DLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKC
EESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLD
NVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAK
SHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFV
AAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITRE
VGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVL
EGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGV
FCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLT
PVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFS
TFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQ
PPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNF
LVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGS
CGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNR
FTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC
SGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLL
PSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVY
YGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLL
NRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQ
LRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAA
FATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLF
TMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLS
EISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQD
LKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLS
FCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLK
GKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVY
RAFDIYNDKVAGFAKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDM
VPHISRQRLTKYTMADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLK
TVQFCDAMRNAGIVGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTFTRALTAESHVDTDLTKPYI
KWDLLKYDFTEERLKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVPFVVST
GYHFRELGVVHNQDVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDF
AVSKGFFKEGSSVELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDK
SAGFPFNKWGKARLYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKS
IAATRGATVVIGTSKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLA
NECAQVLSEMVMCGGSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRN
RDVDTDFVNEFYAYLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEF
CSQHTMLVKQGDDYVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRK
LHDELTGHMLDMYSVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVIS
TSHKLVLSVNPYVCNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDW
TNAGDYILANTCTERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSK
VQIGEYTFEKGDYGDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQ
KVGMQKYSTLQGPPGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKV
NSTLEQYVFCTVNALPETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVC
RLMKTIGPDMFLGTCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNP
AWRKAVFISPYNSQNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLY
DKLQFTSLEIPRRNVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRLISMMG
FKMNYQVNGYPNMFITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVS
AKPPPGDQFKHLIPLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRAT
CFSTASDTYACWHHSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWT
IEYPIIGDELKINAACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYA
THSDKFTDGVCLFWNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSD
SPCESHGKQVVSDIDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQ
SLENVAFNVVNKGHFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVD
IAANTVIWDYKRDAPAHISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVG
PKQASLNGVTLIGEAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEH
IVYGDFSHSQLGGLHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLS
VVSKVVKVTIDYTEISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNV
AKYTQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTAN
KWDLIISDMYDPKTKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNAS
SSEAFLIGCNYLGKPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKG
RLIIRENNRVVISSDVLVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
location int {
from 0,
to 7087,
id gi 067065065065983681
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 174,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 175,
to 812,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 813,
to 2757,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2758,
to 3257,
id gi 067065065065983681
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3258,
to 3563,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3564,
to 3850,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3851,
to 3933,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3934,
to 4131,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4132,
to 4244,
id gi 067065065065983681
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4245,
to 4383,
id gi 067065065065983681
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4384,
to 5315,
id gi 067065065065983681
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5316,
to 5916,
id gi 067065065065983681
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5917,
to 6443,
id gi 067065065065983681
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6444,
to 6789,
id gi 067065065065983681
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6790,
to 7087,
id gi 067065065065983681
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98372", version 1}, gi 067065065065983721
},
descr {
title "ORF1a polyprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 4397,
seq-data iupacaa "MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKD
GTCGLVEVEKGVLPQLEQPYVFIKRSDARTAPHELVAELEGIQYGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGA
GGHRYGADLKSFDLGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAG
KASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFLFPLNSIIKTIQPR
VEKKKLDGFMGRIRSVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAV
VKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGS
EGLNDNLLEILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAW
NIGEQKSILSPLYAFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMA
YITGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQT
FFKLVNKFLALCADSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEE
VVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEV
QGYKSVNIIFELDERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDES
GEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVG
QQDGSEDNQTTTIQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKH
GGGVAGALNKATNNAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLL
APLLSAGIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKEEVKPFITESKPSVE
QRKQDDKKIKACVEEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVI
PTKKASGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREML
AHAEETRKLMPVCVETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLGYVTHGL
NLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSV
YYTSNPTTFHLDGEVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSH
EGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFN
PPALQDAYYRARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVM
YMGTLSYEQFKKGVQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYC
IDGALLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASF
DNFKFVCDNIKFADDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATY
KPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKPAN
NSLKITEEVGHTDLMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTR
CLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLS
VCLGSLIYSTAALGVLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTYPSLETIQITISSFK
WDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYV
WKSYVHVVDGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVAR
DLSLQFKRPINPTDQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKC
EESSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLD
NVLSTFISAARQGFVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAK
SHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFV
AAIFYLITPVHVMSKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITRE
VGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVL
EGSVAYESLRPDTRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGV
FCGVDAVNLFTNMFTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLT
PVYSFLPGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFS
TFEEAALCTFLLNKEMYLKLRSDVLLPLTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQ
PPQISITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNF
LVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGS
CGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNR
FTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQC
SGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLL
PSLATVAYFNMVYMPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVY
YGNALDQAISMWALIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLL
NRYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQ
LRVESSSKLWAQCVQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAA
FATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLF
TMLRKLDNDALNNIINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLS
EISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQD
LKWARFPKSDGTGTIYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLS
FCAFAVDAAKAYKDYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLK
GKYVQIPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
location int {
from 0,
to 4396,
id gi 067065065065983721
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
location int {
from 0,
to 174,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 175,
to 812,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 813,
to 2757,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2758,
to 3257,
id gi 067065065065983721
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3258,
to 3563,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3564,
to 3850,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3851,
to 3933,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3934,
to 4131,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4132,
to 4244,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4245,
to 4383,
id gi 067065065065983721
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4384,
to 4396,
id gi 067065065065983721
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98373", version 1}, gi 067065065065983731
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1268,
seq-data iupacaa "MFVFLVLLPLVSSQCVNLITRTQSYTNSFTRGVYYPDKVFRSSVLHST
QDLFLPFFSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVVIKVC
EFQFCNDPFLDVYYHKNNKSWMESEFRVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSKHTP
INLGRDLPQGFSALEPLVDLPIGINITRFQTLLALHRSYLTPGDSSSGWTAGAAAYYVGYLQPRTFLLKYNENGTITD
AVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNITNLCPFDEVFNATTFASVYAWNRKRISNCVADY
SVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIRGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKLDS
KVGGNYNYRYRLFRKSNLKPFERDISTEIYQAGNKPCNGVAGVNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHAP
ATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTESNKKFLPFQQFGRDIADTTDAVRDPQTLEILDITPCSFGGVSVIT
PGTNTSNQVAVLYQGVNCTEVPVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQTQ
TKSHRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLLQ
YGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAGF
IKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIGV
TQNVLYENQKLIANQFNSAIGKIQDSLSSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVEA
EVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVTY
VPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQPEL
DSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIAG
LIAIVMVTIMLCCMTSCCSFLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1267,
id gi 067065065065983731
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98374", version 1}, gi 067065065065983741
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065065983741
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98375", version 1}, gi 067065065065983751
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065065983751
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98376", version 1}, gi 067065065065983761
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MANSNGTITVEELKKLLEEWNLVIGFLFLTWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFARTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065065983761
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98377", version 1}, gi 067065065065983771
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEID"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065065983771
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98378", version 1}, gi 067065065065983781
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFYP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065065983781
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98379", version 1}, gi 067065065065983791
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLAFLLFLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065065983791
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98369", version 1}, gi 067065065065983691
},
descr {
title "ORF8 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIR
VGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDFI"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF8 protein"
}
},
location int {
from 0,
to 120,
id gi 067065065065983691
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98370", version 1}, gi 067065065065983701
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGPSDSTGSNQNFGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTPSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065065983701
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAA98371", version 1}, gi 067065065065983711
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065065983711
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
except TRUE,
product whole gi 067065065065983681,
location mix {
int {
from 227,
to 13405,
strand plus,
id gi 0670650650114371
},
int {
from 13405,
to 21492,
strand plus,
id gi 0670650650114371
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983721,
location int {
from 227,
to 13420,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983731,
location int {
from 21500,
to 25306,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983741,
location int {
from 25315,
to 26142,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983751,
location int {
from 26167,
to 26394,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983761,
location int {
from 26445,
to 27113,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983771,
location int {
from 27124,
to 27309,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983781,
location int {
from 27316,
to 27681,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983791,
location int {
from 27678,
to 27809,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983691,
location int {
from 27816,
to 28181,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983701,
location int {
from 28196,
to 29446,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 21
}
}
},
{
id local id 22,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065065983711,
location int {
from 29471,
to 29587,
strand plus,
id gi 0670650650114371
},
xref {
{
id local id 23
}
}
}
}
}
}
}
}
}