Salmonella enterica Uroporphyrinogen III synthase (hemD) gene, partial cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Zhao",
first "Meiyuan",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Southwest University",
div "college of veterinary medicine",
city "chongqing",
country "China",
street "tiansheng street",
email "1904196089@qq.com",
postal-code "400715"
}
}
},
cit {
authors {
names std {
{
name name {
last "Zhao",
first "Meiyuan",
initials "M."
}
}
},
affil std {
affil "Southwest University",
div "college of veterinary medicine",
city "chongqing",
country "China",
street "tiansheng street",
postal-code "400715"
}
},
date std {
year 2024,
month 3,
day 26
}
},
subtype new,
tool "table2asn 1.28.943"
},
data entrys {
set {
class genbank,
seq-set {
set {
class nuc-prot,
descr {
source {
org {
taxname "Salmonella enterica",
db {
{
db "taxon",
tag id 28901
}
},
orgname {
mod {
{
subtype strain,
subname "CQJB2020DS046"
},
{
subtype nat-host,
subname "Canis lupus familiaris"
}
},
lineage "Bacteria; Proteobacteria; Gammaproteobacteria;
Enterobacterales; Enterobacteriaceae; Salmonella",
gcode 11,
mgcode 0,
div "BCT"
}
},
subtype {
{
subtype country,
name "China"
},
{
subtype isolation-source,
name "feces"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Sequencing Technology",
data str "Sanger dideoxy sequencing"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2024,
month 3,
day 26
}
},
seq-set {
seq {
id {
genbank { accession "C_AA064130", version 1}, gi 0670650650641301
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels",data bool TRUE },
{label str "LeaveParenthetical",data bool TRUE},
{label str "SpecifyNuclearProduct",data bool TRUE},
{label str "MaxMods",data int 0},
{label str "FeatureListType",data str "List All Features"},
{label str "MiscFeatRule",data str "Delete"},
{label str "HIVRule",data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods",num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol dna,
length 591,
topology linear,
seq-data ncbi2na '78F8FED96B6A279515E9616DE9867868018DEBFF95FD
12465B65FE546548D49A8EB601E979B6599CFD98FA5914699D95F4C5BC9A3D8CF6F353EADA80D2
60B7E710F1783C4033E6A4066678FF9BA43A6B66079EA6015E127668960B43FFB83BCD060B9804
F18E99A0826399E939D9A4C1067EFB4526988EF9049DEB678F552EB36E247AF1C67B69EFADB4B8
9B7A645D95A81EA7A4'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "hemD"
},
partial TRUE,
location int {
from 8,
to 577,
strand plus,
id gi 0670650650641301,
fuzz-from lim lt,
fuzz-to lim gt
},
xref {
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAG78835", version 1}, gi 067065065071788351
},
descr {
title "Uroporphyrinogen III synthase, partial [Salmonella
enterica]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-ends
}
},
inst {
repr raw,
mol aa,
length 190,
seq-data iupacaa "FVAGRELPTLADRLATLTENDLVFALSQHAVAFAHAQIQRDGRN
WPASPRYFAIGRTTALALHTVSGFDIRYPLGREISEVLLQLPELQNIAGKRALILRGNGGRELLGETLTARGAEVNFC
ECYQRSAKHYDGAEEAMRWHARGITTLVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERLAHLAR"
},
annot {
{
data ftable {
{
data prot {
name {
"Uroporphyrinogen III synthase"
}
},
partial TRUE,
location int {
from 0,
to 189,
id gi 067065065071788351,
fuzz-from lim lt,
fuzz-to lim gt
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 11
}
},
partial TRUE,
product whole gi 067065065071788351,
location int {
from 8,
to 577,
strand plus,
id gi 0670650650641301,
fuzz-from lim lt,
fuzz-to lim gt
},
xref {
{
id local id 2
}
}
}
}
}
}
}
}
}
}
}