Severe acute respiratory syndrome coronavirus 2 isolate SARS-CoV-2/human/CHN/HaikouCDC20240730-7/2024 ORF1ab polyprotein (ORF1ab) and ORF1a polyprotein (ORF1ab) genes, partial cds; and surface glycoprotein (S), ORF3a protein (ORF3a), envelope protein (E), membrane glycoprotein (M), ORF6 protein (ORF6), ORF7a protein (ORF7a), ORF7b (ORF7b), ORF8 protein (ORF8), nucleocapsid phosphoprotein (N), and ORF10 protein (ORF10) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Cui",
first "Lei",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "HainanCDC",
div "Microbiology laboratory",
city "Haikou",
country "China",
street "No.40, Haifu Road, Meilan District",
email "hncdcwjs@163.com",
postal-code "570203"
}
}
},
cit {
authors {
names std {
{
name name {
last "Li",
first "Ping",
initials "P."
}
}
},
affil std {
affil "HainanCDC",
div "Microbiology laboratory",
city "Haikou",
sub "Hainan",
country "China",
street "No.40, Haifu Road, Meilan District",
postal-code "570203"
}
},
date std {
year 2024,
month 8,
day 20
}
},
subtype new,
tool "table2asn 1.28.943"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Severe acute respiratory syndrome coronavirus 2",
orgname {
mod {
{
subtype isolate,
subname "SARS-CoV-2/human/CHN/HaikouCDC20240730-7/2024"
},
{
subtype nat-host,
subname "Homo sapiens; Host_age: Unknown"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "China:Hainan,Haikou"
},
{
subtype collection-date,
name "2024-07"
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Genome-Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "CyGas v. 1.0"
},
{
label str "Sequencing Technology",
data str "Nanopore"
},
{
label str "StructuredCommentSuffix",
data str "##Genome-Assembly-Data-END##"
}
}
},
create-date std {
year 2024,
month 8,
day 20
}
},
seq-set {
seq {
id {
genbank { accession "C_AA083471", version 1}, gi 0670650650834711
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 29151,
topology linear,
strand ss,
seq-data ncbi2na 'B1ADB2EB8847EBB5FB574EEA60314BA7C590AF7DF6C206B0
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23CF3BABCDF417287FDCF00CC3803A053C48E7B21EE47E15DDD20102EC6F80D7D1EC800A0DCD01
F707F22D414120DCFBC8FD70EF101FB95FF4E0BFF065148FE4DEFCE7E8128620D241EEF9E3CF7B
5CCC3F6453FF67FC2EF3A2EDD71C0F038DDE7F1C3B73923D3FB0F02B0E0B4940D9D4A901E80CF9
E3CC3CC0F148E3FC4A79BCC9FA0F70427E3DC24CBAC3CE3C7ACC8DBC282DC07405FF8888CFD078
0DCD296B0445FB02B02B5C3EF1FD7F10D33AFD6151F3AEFAD1414C48B2CB1FDFF81F713914907B
FBA17002DC70FEBC0040EED0FD07D0EBF04A44AEF7C70B70400BF797F5043FA4884FBE11C78E7B
5B8D44847E23DF84F114EF7FEBAED2EF3045281031F7052BE7BDFCD2AEF079120B77BE73D39234
1F1D71FA6EFCF712BDC3BFF4046E4A7BF0CAA7833B41074CE2EE13153EB92B3399CBCD21D21C2D
DB69A91B2EC9CB43534F9711CED1FAE4803D2F9F1DC30773E5315103FC73CBBC51203DC52EDCE1
42134B23EC43B13FBAE3D078392437FEF90CE92FFEC443C01B9FC1E8327BE042100115082FFE44
2D0103F10045143C0CFFAEBFC3FF440CF148D4D0050908AD3F3E08DC7FD040B847E48E7A7D3404
33AE3E5FAE33E79C885D3FB9100BF0697C7BFE517F9D12380E3E74311F791EF26AC4347DEBE85F
EB92B9E4F10314FE73903A7CCAFC3ACFA2F1120EF773881400F8F94143F0CB9CFA403D08747FFD
4490B91FA007D08EEB414C39109FC0467EF0107C9D40FEB90FD0BBFC0E335FD1B7E102F8A782E4
0F8CAF8D12921F40BF92133B87410F0F2279203489F79C37E79C700ED22EEC7E8434008BE3FFBA
02A734DF3B5F574B49174EBB2DF7E4EE1F3B5791080207D1079D794FED38E802447F5DB82BB7FB
F40E9111EBFB0440A0FFCE051034F1C484113FBB7AC1EE3BEC3283ED04112FCE35FE41F83C8F4F
428A2F23033FC20D3134523BE3F2B84DDE93C39F4BEC04F40080F8597438AF9420FC0E0DDD3637
5081FA02CE24B3300E94EB33FA72BFCC9E9F8F94CB0EB843CE7F9ECE14BE7B2FB742A7BEF7EE8D
79E40FE3821877894B9D028B40F13C44C0607CE8FEFCE20DF443E81EC1FE090AE03428E71D7D23
FEF6671E418C58C425D1D5FDA3A7CFBE9BE47DF9EFFD2267D4034C1DD00223A41C91DD42AEF47F
BF907E7BEFBFB04BF1D117FE76F9E7A5F8255FF7737F39FCB71F7E48B301FEC20C30E29FE9FE7A
0396F500153C7F38E5073FDFE7A4C70FBC61CFB317C432EC1F7D0FB4F1F4AE3A4410B5CFDE04E1
C523EBAF31E003A837A2C021EEFB3C44BC7D1F4873C527B1D0743E2C484FAEF813BC5F7D3710C0
3EF8E25E0813B503D110D86BD35A2FBC352C3A050FCE38161861C726E5FEC244278E2C607CEC74
F6FDA088CAC6F0CBC326C7DFFDF9FDBACF7E72F11C94D7C799F63EEE6C79E433EF06E2DFB005F7
FF1BF1DDBBC00DE0F7DC8BD78DF7ADC0607033CCF2FFDEFE81FC3FC94E913D41AC73C5BE089F00
275F820E8172C32BF5CF5F93A3FB7DC43F9739412832BFFB330F0BC3FF77A7BCE94B07F07EFFB9
F9E7BF120C0FA345AE83E73643A7EDFB29F8EE9D271F4F9F7F487BFB9B19BD4EEB4FC35201C13D
F7C1B94753A473DE14859F7202E076C3689EE35F6E84DF6CF9E845372867B84D0A1797020347BE
71346067F7CF103EA27D926EC92B874AFF9E4C4B67128FA41CC0F011214F52C92E10CF9FE7EC4B
0B84123BF4DDBE1FD2BC732488CF1C3CF39A1FF02FD4FE837E3C4D30174C3C00FCDC2D1C1E20C0
CF743C8E089050E88F7701813803CF7FDFA478C11D9C7EE27F3471422EEF22B104B1FF00817E77
DE81318A90F453F4D77278C103F91E1F9FC91D0FE7FE7ED7869B0046DCD2F1B948D2FD1701EF4D
2108A0BD081FC7750FFDF3EF9A432EFCC11FE7D11D008084838F81FD3C3E1F73FB9FFC97F7BC75
FBFC3CE7CF37FEBDD1F81E4234C3807ED1970181380FDFBFDF2834D107B2793F45083B2FC4B4EC
7413414CECBE3856ED73D1F73DC0EB33C8B289C8034917F0F83EE6E8E29EBDC0D153D2C4D8CDAC
3CC4BF5EFC5FF10F0F94A05C0FAB2DFB2E6FBDBDCE087FF22CD386F6EFBFC8FD37018101F03B78
C3A154014980E47593C6FEBA15D23D07A4B0520EBAA66340106DA550AFC5430C79B7EBD1677474
13A428217C0F57628429BD43C114324B5238503E9C716089C52183DBAEB86B00E02374B508EB3F
71C5CA07A94827A1F573AE704086934CEAF9078A897E0C45008D13E91590D79C10E790DB9C41F5
D0A0413E500A7DC6482A248A692D0977DDBD74D1B2D904BD080F41D4A492C0607DD79C83A7A43A
6B8E79DF9FE79E7E123E0527E22403B7AC0A50410429407B47080DE79E29F70825DA4006C79470
24C43B04427F6921BAD4810150A03FEA85281C3484281E3C404FA5903E443F955267D26F7DA0ED
993E93A0B44DF6A06EBE17112B94D03E8E1023503F408D0B4FF9E0C24CF864C4013D5141225C00
A10020829E3807425F16488482012407B877DF5E7923FA38FDD4043E410D4E25B9E1D074A5C074
E485110A48EA73301BFD9FF5BF18CCCB71DFB920E0F76C1C4C910B23B2F07F0DD132437F0D2EEC
13CA8A1F80894513FD14'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1ab"
},
partial TRUE,
location int {
from 0,
to 20993,
strand plus,
id gi 0670650650834711,
fuzz-from lim lt
},
xref {
{
id local id 1
},
{
id local id 3
}
}
},
{
id local id 5,
data gene {
locus "S"
},
location int {
from 21001,
to 24810,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 4
}
}
},
{
id local id 7,
data gene {
locus "ORF3a"
},
location int {
from 24819,
to 25646,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 6
}
}
},
{
id local id 9,
data gene {
locus "E"
},
location int {
from 25671,
to 25898,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 8
}
}
},
{
id local id 11,
data gene {
locus "M"
},
location int {
from 25949,
to 26617,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 10
}
}
},
{
id local id 13,
data gene {
locus "ORF6"
},
location int {
from 26628,
to 26813,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 12
}
}
},
{
id local id 15,
data gene {
locus "ORF7a"
},
location int {
from 26820,
to 27185,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 14
}
}
},
{
id local id 17,
data gene {
locus "ORF7b"
},
location int {
from 27182,
to 27313,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 16
}
}
},
{
id local id 19,
data gene {
locus "ORF8"
},
location int {
from 27320,
to 27685,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 18
}
}
},
{
id local id 21,
data gene {
locus "N"
},
location int {
from 27700,
to 28950,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 20
}
}
},
{
id local id 23,
data gene {
locus "ORF10"
},
location int {
from 28975,
to 29091,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 22
}
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 1",
location int {
from 12914,
to 12941,
strand plus,
id gi 0670650650834711
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus frameshifting stimulation element
stem-loop 2",
location int {
from 12926,
to 12980,
strand plus,
id gi 0670650650834711
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 1",
location int {
from 29026,
to 29061,
strand plus,
id gi 0670650650834711
}
},
{
data imp {
key "stem_loop"
},
comment "Coronavirus 3' UTR pseudoknot stem-loop 2",
location int {
from 29046,
to 29074,
strand plus,
id gi 0670650650834711
}
},
{
data imp {
key "stem_loop"
},
partial TRUE,
comment "Coronavirus 3' stem-loop II-like motif (s2m)",
location int {
from 29145,
to 29150,
strand plus,
id gi 0670650650834711,
fuzz-to lim gt
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61883", version 1}, gi 067065065073618831
},
descr {
title "ORF1ab polyprotein, partial [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-left
}
},
inst {
repr raw,
mol aa,
length 6997,
seq-data iupacaa "YGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHRYGADLKSFD
LGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFI
DTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRI
RFVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEV
GPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQK
EKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLY
AFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQW
LTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCA
DSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQ
PTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNIIFELD
ERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSF
YPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTI
QTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATN
NAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADP
IHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKDEVKPFITESKPSVEQRKQDDKKIKACV
EEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKASGTTEMLA
KALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVC
VETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKITVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLK
VPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDG
EVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDT
LRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARA
GEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKG
IQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYK
GPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWST
KPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKQANNSLKITEEVGHTD
LMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYF
FTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAAL
GVLMSNLGMPSYCTGYREGYLNSTNVTIATYCIGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWF
LAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNS
STCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPT
DQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYS
QLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQG
FVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDF
MSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVM
SKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTIL
RTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDT
RYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLFTNM
FTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLTPVYSFLPGVYSVI
YLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLN
KEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQISITSAVLQS
GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIG
HSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGSCGSVGFNIDYDCV
SFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAM
KYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTI
KGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVY
MPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWA
LIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDY
LVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQC
VQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVA
NGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNN
IINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWP
LIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTG
TIYTELEPPCRFVTDTLKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYK
DYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCAND
PVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNRVCGVSAARLTPCGTGTSTDVVYRAFDIYNDKVAGF
AKFLKTNCCRFQEKDEDDNLIDSYFVVKRHTFSNYQHEETIYNLLKDCPAVAKHDFFKFRIDGDMVPHISRQRLTKYT
MADLVYALRHFDEGNCDTLKEILVTYNCCDDDYFNKKDWYDFVENPDILRVYANLGERVRQALLKTVQFCDAMRNAGI
VGVLTLDNQDLNGNWYDFGDFIQTTPGSGVPVVDSYYSLLMPILTLTRALTAESHVDTDLTKPYIKWDLLKYDFTEER
LKLFDRYFKYWDQTYHPNCVNCLDDRCILHCANFNVLFSTVFPLTSFGPLVRKIFVDGVPFVVSTGYHFRELGVVHNQ
DVNLHSSRLSFKELLVYAADPAMHAASGNLLLDKRTTCFSVAALTNNVAFQTVKPGNFNKDFYDFAVSKGFFKEGSSV
ELKHFFFAQDGNAAISDYDYYRYNLPTMCDIRQLLFVVEVVDKYFDCYDGGCINANQVIVNNLDKSAGFPFNKWGKAR
LYYDSMSYEDQDALFAYTKRNVIPTITQMNLKYAISAKNRARTVAGVSICSTMTNRQFHQKLLKSIAATRGATVVIGT
SKFYGGWHNMLKTVYSDVENPHLMGWDYPKCDRAMPNMLRIMASLVLARKHTTCCSLSHRFYRLANECAQVLSEMVMC
GSSLYVKPGGTSSGDATTAYANSVFNICQAVTANVNALLSTDGNKIADKYVRNLQHRLYECLYRNRDVDTDFVNEFYA
YLRKHFSMMILSDDAVVCFNSTYASQGLVASIKNFKSVLYYQNNVFMSEAKCWTETDLTKGPHEFCSQHTMLVKQGDD
YVYLPYPDPSRILGAGCFVDDIVKTDGTLMIERFVSLAIDAYPLTKHPNQEYADVFHLYLQYIRKLHDELTGHMLDMY
SVMLTNDNTSRYWEPEFYEAMYTPHTVLQAVGACVLCNSQTSLRCGACIRRPFLCCKCCYDHVIPTSHKLVLSVNPYV
CNAPGCDVTDVTQLYLGGMSYYCKSHKPPISFPLCANGQVFGLYKNTCVGSDNVTDFNAIATCDWTNAGDYILANTCT
ERLKLFAAETLKATEETFKLSYGIATVREVLSDRELHLSWEVGKPRPPLNRNYVFTGYRVTKNSKVQIGEYTFEKGDY
GDAVVYRGTTTYKLNVGDYFVLTSHTVMPLSAPTLVPQEHYVRITGLYPTLNISDEFSSNVANYQKVGMQKYSTLQGP
PGTGKSHFAIGLALYYPSARIVYTACSHAAVDALCEKALKYLPIDKCSRIIPARARVECFDKFKVNSTLEQYVFCTVN
ALPETTADIVVFDEISMATNYDLSVVNARLCAKHYVYIGDPAQLPAPRTLLTKGTLEPEYFNSVCRLMKTIGPDMFLG
TCRRCPAEIVDTVSALVYDNKLKAHKDKSAQCFKMFYKGVITHDVSSAINRPQIGVVREFLTRNPAWRKAVFISPYNS
QNAVASKILGLPTQTVDSSQGSEYDYVIFTQTTETAHSCNVNRFNVAITRAKVGILCIMSDRDLYDKLQFTSLEIPRR
NVATLQAENVTGLFKDCSKVITGLHPTQAPTHLSVDTKFKTEGLCVDVPGIPKDMTYRRLISMMGFKMNYQVNGYPNM
FITREEAIRHVRAWIGFDVEGCHATREAVGTNLPLQLGFSTGVNLVAVPTGYVDTPNNTDFSRVSAKPPPGDQFKHLI
PLMYKGLPWNVVRIKIVQMLSDTLKNLSDRVVFVLWAHGFELTSMKYFVKIGPERTCCLCDRRATCFSTASDTYACWH
HSIGFDYVYNPFMIDVQQWGFTGNLQSNHDLYCQVHGNAHVASCDAIMTRCLAVHECFVKRVDWTIEYPIIGDELKIN
AACRKVQHMVVKAALLADKFPVLHDIGNPKAIKCVPQADVEWKFYDAQPCSDKAYKIEELFYSYATHSDKFTDGVCLF
WNCNVDRYPANSIVCRFDTRVLSNLNLPGCDGGSLYVNKHAFHTPAFDKSAFVNLKQLPFFYYSDSPCESHGKQVVSD
IDYVPLKSATCITRCNLGGAVCRHHANEYRLYLDAYNMMISAGFSLWVYKQFDTYNLWNTFTRLQSLENVAFNVVNKG
HFDGQQGEVPVSIINNTVYTKVDGVDVELFENKTTLPVNVAFELWAKRNIKPVPEVKILNNLGVDIAANTVIWDYKRD
APAHISTIGVCSMTDIAKKPIETICAPLTVFFDGRVDGQVDLFRNARNGVLITEGSVKGLQPSVGPKQASLNGVTLIG
EAVKTQFNYYKKVDGVVQQLPETYFTQSRNLQEFKPRSQMEIDFLELAMDEFIERYKLEGYAFEHIVYGDFSHSQLGG
LHLLIGLAKRFKESPFELEDFIPMDSTVKNYFITDAQTGSSKCVCSVIDLLLDDFVEIIKSQDLSVVSKVVKVTIDYT
EISFMLWCKDGHVETFYPKLQSSQAWQPGVAMPNLYKMQRMLLEKCDLQNYGDSATLPKGIMMNVAKYTQLCQYLNTL
TLAVPYNMRVIHFGAGSDKGVAPGTAVLRQWLPTGTLLVDSDLNDFVSDADSTLIGDCATVHTANKWDLIISDMYDPK
TKNVTKENDSKEGFFTYICGFIQQKLALGGSVAIKITEHSWNADLYKLMGHFAWWTAFVTNVNASSSEAFLIGCNYLG
KPREQIDGYVMHANYIFWRNTNPIQLSSYSLFDMSKFPLKLRGTAVMSLKEGQINDMILSLLSKGRLIIRENNRVVIS
SDVLVNN"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1ab polyprotein"
}
},
partial TRUE,
location int {
from 0,
to 6996,
id gi 067065065073618831,
fuzz-from lim lt
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
partial TRUE,
location int {
from 0,
to 83,
id gi 067065065073618831,
fuzz-from lim lt
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 84,
to 721,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 722,
to 2666,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2667,
to 3166,
id gi 067065065073618831
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3167,
to 3472,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3473,
to 3759,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3760,
to 3842,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3843,
to 4040,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4041,
to 4153,
id gi 067065065073618831
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4154,
to 4292,
id gi 067065065073618831
}
},
{
data prot {
name {
"RNA-dependent RNA polymerase"
},
processed mature
},
location int {
from 4293,
to 5224,
id gi 067065065073618831
}
},
{
data prot {
name {
"helicase"
},
processed mature
},
location int {
from 5225,
to 5825,
id gi 067065065073618831
}
},
{
data prot {
name {
"3'-to-5' exonuclease"
},
processed mature
},
location int {
from 5826,
to 6352,
id gi 067065065073618831
}
},
{
data prot {
name {
"endoRNAse"
},
processed mature
},
location int {
from 6353,
to 6698,
id gi 067065065073618831
}
},
{
data prot {
name {
"2'-O-ribose methyltransferase"
},
processed mature
},
location int {
from 6699,
to 6996,
id gi 067065065073618831
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61887", version 1}, gi 067065065073618871
},
descr {
title "ORF1a polyprotein, partial [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-left
}
},
inst {
repr raw,
mol aa,
length 4306,
seq-data iupacaa "YGRSGETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHRYGADLKSFD
LGDELGTDPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECIKDLLARAGKASCTLSEQLDFI
DTKRGVYCCREHEHEIAWYTERSEKSYELQTPFEIKLAKKFDTFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRI
RFVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTKEGATTCGYLPQNAVVKIYCPACHNSEV
GPEHSLAEYHNESGLKTILRKGGRTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLLEILQK
EKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQIVESCGNFKVTKGKAKKGAWNIGEQKSILSPLY
AFASEAARVVRSIFSRTLETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYITGGVVQLTSQW
LTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKFISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCA
DSIIIGGAKLKALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEVLTEEVVLKTGDLQPLEQ
PTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCALAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNIIFELD
ERIDKVLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWSMATYYLFDESGEFKLASHMYCSF
YPPDEDEEEGDCEEEEFEPSTQYEYGTEDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTTI
QTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKKVKPTVVVNAANVYLKHGGGVAGALNKATN
NAMQVESDDYIATNGPLKVGGSCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSAGIFGADP
IHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQKIAEIPKDEVKPFITESKPSVEQRKQDDKKIKACV
EEVTTTLEETKFLTENLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVIPTKKASGTTEMLA
KALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKSAFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVC
VETKAIVSTIQRKYKGIKIQEGVVDYGARFYFYTSKITVASLINTLNDLNETLVTMPLGYVTHGLNLEEAARYMRSLK
VPATVSVSSPDAVTAYNGYLTSSSKTPEEHFIETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDG
EVITFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDGADVTKIKPHNSHEGKTFYVLPNDDT
LRVEAFEYYHTTDPSFLGRYMSALNHTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYRARA
GEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVVCKTCGQQQTTLKGVEAVMYMGTLSYEQFKKG
IQIPCTCGKQATKYLVQQESPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGALLTKSSEYK
GPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYKKDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFA
DDLNQLTGYKKPASRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKATYKPNTWCIRCLWST
KPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEVVENPTIQKDVLECNVKTTEVVGDIILKQANNSLKITEEVGHTD
LMAAYVDNSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVSTTTNIVTRCLNRVCTNYMPYF
FTLLLQLCTFTRSTNSRIKASMPTTIAKNTVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAAL
GVLMSNLGMPSYCTGYREGYLNSTNVTIATYCIGSIPCSVCLSGLDSLDTYPSLETIQITISSFKWDLTAFGLVAEWF
LAYILFTRFFYVLGLAAIMQLFFSYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVVDGCNS
STCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWNCVNCDTFCAGSTFISDEVARDLSLQFKRPINPT
DQSSYIVDSVTVKNGSIHLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEESSAKSASVYYS
QLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSSTFNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQG
FVDSDVETKDVVECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINAQVAKSHNIALIWNVKDF
MSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVVNVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVM
SKHTDFSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKACPLIAAVITREVGFVVPGLPGTIL
RTTNGDFLHFLPRVFSAVGNICYTPSKLIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPDT
RYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTSGRWVLNNDYYRSLPGVFCGVDAVNLFTNM
FTPLIQPIGALDISASIVAGGIVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFIVLCLTPVYSFLPGVYSVI
YLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTKHFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLN
KEMYLKLRSDVLLPFTQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQPPQISITSAVLQS
GFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIG
HSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRHNFTIKGSFLNGSCGSVGFNIDYDCV
SFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAM
KYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQSAVKRTI
KGTHHWLLLTILTSLLVLVQSTQWSLFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLLPSLATVAYFNMVY
MPASWVMRIMTWLDMVDTSLKLKDCVMYASAVVLLILMTARTVYDDGARRVWTLMNVLTLVYKVYYGNALDQAISMWA
LIISVTSNYSGVVTTVMFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLNRYFRLTLGVYDY
LVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKPCIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQC
VQLHNDILLAKDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSLPSYAAFATAQEAYEQAVA
NGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKLEKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNN
IINNARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQVVDADSKIVQLSEISMDNSPNLAWP
LIVTALRANSAVKLQNNELSPVALRQMSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDGTG
TIYTELEPPCRFVTDTLKGPKVKYLYFIKGLNNLNRGMVLGSLAATVRLQAGNATEVPANSTVLSFCAFAVDAAKAYK
DYLASGGQPITNCVKMLCTHTGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQIPTTCAND
PVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLNGFAV"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF1a polyprotein"
}
},
partial TRUE,
location int {
from 0,
to 4305,
id gi 067065065073618871,
fuzz-from lim lt
}
},
{
data prot {
name {
"leader protein"
},
processed mature
},
partial TRUE,
location int {
from 0,
to 83,
id gi 067065065073618871,
fuzz-from lim lt
}
},
{
data prot {
name {
"nsp2"
},
processed mature
},
location int {
from 84,
to 721,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp3"
},
processed mature
},
location int {
from 722,
to 2666,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp4"
},
processed mature
},
location int {
from 2667,
to 3166,
id gi 067065065073618871
}
},
{
data prot {
name {
"3C-like proteinase"
},
processed mature
},
location int {
from 3167,
to 3472,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp6"
},
processed mature
},
location int {
from 3473,
to 3759,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp7"
},
processed mature
},
location int {
from 3760,
to 3842,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp8"
},
processed mature
},
location int {
from 3843,
to 4040,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp9"
},
processed mature
},
location int {
from 4041,
to 4153,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp10"
},
processed mature
},
location int {
from 4154,
to 4292,
id gi 067065065073618871
}
},
{
data prot {
name {
"nsp11"
},
processed mature
},
location int {
from 4293,
to 4305,
id gi 067065065073618871
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61888", version 1}, gi 067065065073618881
},
descr {
title "surface glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1269,
seq-data iupacaa "MFVFLVLLPLVSSQCVMPLFNLITTTQSYTNSFTRGVYYPDKVFRSSV
LHLTQDLFLPFFSNVTWFHAISGTNGTKRFDNPVLPFNDGVYFASTEKSNIIRGWIFGTTLDSKTQSLLIVNNATNVF
IKVCEFQFCNDPFLDVYHKNNKSWMESESGVYSSANNCTFEYVSQPFLMDLEGKQGNFKNLREFVFKNIDGYFKIYSK
HTPIIGRDFPQGFSALEPLVDLPIGINITRFQTLLALNRSYLTPGDSSSGWTAGATDYYVGYLQPRTFLLKYNENGTI
TDAVDCALDPLSETKCTLKSFTVEKGIYQTSNFRVQPTESIVRFPNVTNLCPFHEVFNATRFASVYAWNRTRISNCVA
DYSVLYNFAPFFAFKCYGVSPTKLNDLCFTNVYADSFVIKGNEVSQIAPGQTGNIADYNYKLPDDFTGCVIAWNSNKL
DSKHSGNYDYWYRSLRKSKLKPFERDISTEIYQAGNTPCKGKGPNCYFPLQSYGFRPTYGVGHQPYRVVVLSFELLHA
PATVCGPKKSTNLVKNKCVNFNFNGLTGTGVLTKSNKKFLPFQQFGRDIVDTTDAVRDPQTLEILDITPCSFGGVSVI
TPGTNTSNQVAVLYQGVNCTEVSVAIHADQLTPTWRVYSTGSNVFQTRAGCLIGAEYVNNSYECDIPIGAGICASYQT
QTKSRRRARSVASQSIIAYTMSLGAENSVAYSNNSIAIPTNFTISVTTEILPVSMTKTSVDCTMYICGDSTECSNLLL
QYGSFCTQLKRALTGIAVEQDKNTQEVFAQVKQIYKTPPIKYFGGFNFSQILPDPSKPSKRSFIEDLLFNKVTLADAG
FIKQYGDCLGDIAARDLICAQKFNGLTVLPPLLTDEMIAQYTSALLAGTITSGWTFGAGAALQIPFAMQMAYRFNGIG
VTQNVLYENQKLIANQFNSAIGKIQDSLFSTASALGKLQDVVNHNAQALNTLVKQLSSKFGAISSVLNDILSRLDKVE
AEVQIDRLITGRLQSLQTYVTQQLIRAAEIRASANLAATKMSECVLGQSKRVDFCGKGYHLMSFPQSAPHGVVFLHVT
YVPAQEKNFTTAPAICHDGKAHFPREGVFVSNGTHWFVTQRNFYEPQIITTDNTFVSGNCDVVIGIVNNTVYDPLQLE
LDSFKEELDKYFKNHTSPDVDLGDISGINASVVNIQKEIDRLNEVAKNLNESLIDLQELGKYEQYIKWPWYIWLGFIA
GLIAIVMVTIMLCCMTSCCSCLKGCCSCGSCCKFDEDDSEPVLKGVKLHYT"
},
annot {
{
data ftable {
{
data prot {
name {
"surface glycoprotein"
}
},
location int {
from 0,
to 1268,
id gi 067065065073618881
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61889", version 1}, gi 067065065073618891
},
descr {
title "ORF3a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 275,
seq-data iupacaa "MDLFMRIFTIGTVTLKQGEIKDATPSDFVRATATIPIQASLPFGWLIV
GVALLAVFQSASKIITLKKRWQLALSKGVHFVCNLLLLFVTVYSHLLLVAAGLEAPFLYLYALVYFLQSINFVRIIMR
LWLCWKCRSKNPLLYDANYFLCWHTNCYDYCIPYNSVTSSIVITSGDGTTSPISEHDYQIGGYTEKWESGVKDCVVLH
SYFTSDYYQLYSTQLSTDIGVEHVTFFIYNKIVDEPEEHVQIHTIDGSSGVVNPVMEPIYDEPTTTTSVPL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF3a protein"
}
},
location int {
from 0,
to 274,
id gi 067065065073618891
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61890", version 1}, gi 067065065073618901
},
descr {
title "envelope protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 75,
seq-data iupacaa "MYSFVSEEIGTLIVNSVLLFLAFVVFLLVTLAILTALRLCAYCCNIVN
VSLVKPSFYVYSRVKNLNSSRVPDLLV"
},
annot {
{
data ftable {
{
data prot {
name {
"envelope protein"
}
},
location int {
from 0,
to 74,
id gi 067065065073618901
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61891", version 1}, gi 067065065073618911
},
descr {
title "membrane glycoprotein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 222,
seq-data iupacaa "MAHSNGTITVEELKKLLEEWNLVIGFLFLAWICLLQFAYANRNRFLYI
IKLIFLWLLWPVTLTCFVLAAVYRINWITGGIAIAMACLVGLMWLSYFIASFRLFVRTRSMWSFNPETNILLNVPLHG
TILTRPLLESELVIGAVILRGHLRIAGHHLGRCDIKDLPKEITVATSRTLSYYKLGASQRVAGDSGFAAYSRYRIGNY
KLNTDHSSSSDNIALLVQ"
},
annot {
{
data ftable {
{
data prot {
name {
"membrane glycoprotein"
}
},
location int {
from 0,
to 221,
id gi 067065065073618911
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61892", version 1}, gi 067065065073618921
},
descr {
title "ORF6 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 61,
seq-data iupacaa "MFHLVDFQVTIAEILLIIMRTFKVSIWNLDYIINLIIKNLSKSLTENK
YSQLDEEQPMEIL"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF6 protein"
}
},
location int {
from 0,
to 60,
id gi 067065065073618921
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61893", version 1}, gi 067065065073618931
},
descr {
title "ORF7a protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKIILFLALITLATCELYHYQECVRGTTVLLKEPCSSGTYEGNSPFHP
LADNKFALTCFSTQFAFACPDGVKHVYQLRARSVSPKLFIRQEEVQELYSPIFLIVAAIVFITLCFTLKRKTE"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7a protein"
}
},
location int {
from 0,
to 120,
id gi 067065065073618931
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61894", version 1}, gi 067065065073618941
},
descr {
title "ORF7b [Severe acute respiratory syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 43,
seq-data iupacaa "MIELSLIDFYLCFLAFLLLLVLIMLIIFWFSLELQDHNETCHA"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF7b"
}
},
location int {
from 0,
to 42,
id gi 067065065073618941
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61884", version 1}, gi 067065065073618841
},
descr {
title "ORF8 protein [Severe acute respiratory syndrome coronavirus
2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 121,
seq-data iupacaa "MKFLVFLGIITTVAAFHQECSLQSCTQHQPYVVDDPCPIHFYSKWYIR
VGARKSAPLIELCVDEAGSKSPIQYIDIGNYTVSCLPFTINCQEPKLGSLVVRCSFYEDFLEYHDVRVVLDFI"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF8 protein"
}
},
location int {
from 0,
to 120,
id gi 067065065073618841
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61885", version 1}, gi 067065065073618851
},
descr {
title "nucleocapsid phosphoprotein [Severe acute respiratory
syndrome coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 416,
seq-data iupacaa "MSDNGPQNQRNALRITFGGPSDSTGSNQNGGARSKQRRPQGLPNNTAS
WFTALTQHGKEDLKFPRGQGVPINTNSSPDDQIGYYRRATRRIRGGDGKMKDLSPRWYFYYLGTGPEAGLPYGANKDG
IIWVATEGALNTPKDHIGTRNPANNAAIVLQLPQGTTLPKGFYAEGSRGGSQASSRSSSRSRNSSRNSTPGSSKRTSP
ARMAGNGGDAALALLLLDRLNQLESKMSGKGQQQQGQTVTKKSAAEASKKPRQKRTATKAYNVTQAFGRRGPEQTQGN
FGDQELIRQGTDYKHWPQIAQFAPSASAFFGMSRIGMEVTSSGTWLTYTGAIKLDDKDPNFKDQVILLNKHIDAYKTF
PPTEPKKDKKKKADETQALPQRQKKQQTVTLLPAADLDDFSKQLQQSMSRADSTQA"
},
annot {
{
data ftable {
{
data prot {
name {
"nucleocapsid phosphoprotein"
}
},
location int {
from 0,
to 415,
id gi 067065065073618851
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAI61886", version 1}, gi 067065065073618861
},
descr {
title "ORF10 protein [Severe acute respiratory syndrome
coronavirus 2]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 38,
seq-data iupacaa "MGYINVFAFPFTIYSLLLCRMNSRNYIAQVDVVNFNLT"
},
annot {
{
data ftable {
{
data prot {
name {
"ORF10 protein"
}
},
location int {
from 0,
to 37,
id gi 067065065073618861
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame two,
code {
id 1
}
},
partial TRUE,
except TRUE,
product whole gi 067065065073618831,
location mix {
int {
from 0,
to 12906,
strand plus,
id gi 0670650650834711,
fuzz-from lim lt
},
int {
from 12906,
to 20993,
strand plus,
id gi 0670650650834711
}
},
xref {
{
id local id 2
}
},
except-text "ribosomal slippage"
},
{
id local id 3,
data cdregion {
frame two,
code {
id 1
}
},
partial TRUE,
product whole gi 067065065073618871,
location int {
from 0,
to 12921,
strand plus,
id gi 0670650650834711,
fuzz-from lim lt
},
xref {
{
id local id 2
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618881,
location int {
from 21001,
to 24810,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 5
}
}
},
{
id local id 6,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618891,
location int {
from 24819,
to 25646,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 7
}
}
},
{
id local id 8,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618901,
location int {
from 25671,
to 25898,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618911,
location int {
from 25949,
to 26617,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 11
}
}
},
{
id local id 12,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618921,
location int {
from 26628,
to 26813,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 13
}
}
},
{
id local id 14,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618931,
location int {
from 26820,
to 27185,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 15
}
}
},
{
id local id 16,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618941,
location int {
from 27182,
to 27313,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 17
}
}
},
{
id local id 18,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618841,
location int {
from 27320,
to 27685,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 19
}
}
},
{
id local id 20,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618851,
location int {
from 27700,
to 28950,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 21
}
}
},
{
id local id 22,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065073618861,
location int {
from 28975,
to 29091,
strand plus,
id gi 0670650650834711
},
xref {
{
id local id 23
}
}
}
}
}
}
}
}
}