Viruses isolate Culex/Museum12/2023/virus Serine protease (serineprotease2) and RNA dependent RNA polymerase (RdRp) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Viruses",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum12/2023/virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111730", version 1}, gi 0670650651117301
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2757,
            topology linear,
            strand ss,
            seq-data ncbi4na '488811484882818111881281118288884211281848188214
128824444118421844428841288821148814241424418828882424148128221424844882221244
84884414828848F481182848824814144141824811112212148818848211241224844144882442
211221118841221814418844284214224284244248181484218844241884481441148811141414
281142242212488184141121142242281128128881144111488228122284488242221841844184
282211121882212214442114841118844241841814441114121184821882442881814421484421
812424884484148128842821282211222181182881844184482144121822181841814414444221
1441842448821848111128441818441421848118141218142822141F4888244211881148881284
144281288448242148844421814282424242488814428484828214441141221244282148484841
4882848441F1842411848211884411282841121884144224184428422884412482848888182144
418211241824284488181424418214228181221284421181144848844421842181242184481144
114884424484414428124141821848188848121841148841148814221222422118444184142484
184121188124188181214184282118184241221842148124144184484484144122814421114281
824812484114241484421118182142824881118214148841884241111884112118422422484188
124882414411428444224184141484142818124188184142142412844281414424148121414114
118484282842282188128224411124882288248888244444114422148282214282124444214148
184414144814212241442222842444888214484218282482218822244812142112821211444114
288848182124224288421121242828241141114148842114284222841188121114414884418212
442218211841481214222142241812414221141142441484414282288284218221188111841442
142441424124211112418841442222411841142841118141442448212812148488141141888281
811112842818484811422848214282228884411882824821411888241121188428118412128441
211882882442422444881222881821124141142822112218144841F84488111418248841844118
422211818148821148241424228184481841248421188148218424144241181241821218188814
442888248211141841122121811142482111148211142444811484414488418218142182482288
422148821118448184424118428481288814221411241442888111842214882814212118222182
111121844888848488884281844844484414414188228242218442811112811144118812118282
424841818282142884441248411242822844884448288211448448444814488124442214484482
844148841841841184414424448421211818488481212241242281841441882224418828888282
811844188418848811121488188221144488218411182444828288211812218212141211282218
442818448442418421218228142884888114182811282118818844221118888242212144241841
248248421441148884814841841181888414248828841411428144484824448411441488418211
821818141488818444128882888814112144111422841422228881848442211121218448211888
218484811441444828141111441448888141214281284824811881842841482441481888841888
284421244488142411114888444218121188422282824882281881224888284418482414822228
442121421248842442142814188418418484182814222441828284414484211181488118181442
4888242242482818188144884218282211888848844888218181842120'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "serineprotease2"
                  },
                  location int {
                    from 38,
                    to 1444,
                    strand plus,
                    id gi 0670650651117301
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Serine protease"
                  },
                  location int {
                    from 38,
                    to 1444,
                    strand plus,
                    id gi 0670650651117301
                  },
                  xref {
                    {
                      data gene {
                        locus "serineprotease2"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "RdRp"
                  },
                  location int {
                    from 1141,
                    to 2658,
                    strand plus,
                    id gi 0670650651117301
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  location int {
                    from 1141,
                    to 2658,
                    strand plus,
                    id gi 0670650651117301
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25408", version 1}, gi 067065065076254081
          },
          descr {
            title "MAG: Serine protease [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 468,
            seq-data iupacaa "MYSDFGECMGLTFKLASGFFREYSSVVPTVLESCXNLFVEEIVKPQLL
STTVEVRPTKLTIGLAAAAAAYSALAIGRKLKRAKPPRYENKPPNYFKESSYPGSPMMDAPNIPPGQVKLAMIGKDNV
IRLIGSGIRVGEYLLTPTHNLMDGQDIHMIGGAKDAVHVKLDMEHVIDIAPXVSAIKFTEATWSQLGIARARLGCVSG
KTTAQCVSSVXMRMSIGTLNIEADGCLGRLFYQGSTIAGYSGSAYTTGNKVLGMHTHGKEVGGGGYEIMYLYMKLKLA
TRQWDERDDNYDYTDAQYATMQYEDGGEDLGKAIVREASGKYQLVKSELIAKIEQCRRDYVRGSWADESELYDYEQRL
ARGEYREECALPHYSGNVPSFSGEGQSPAHGAEYGEVAPRPLRVSGASRPFPVQQLTREALYHAACNTLSKKELQAAL
NYKGVGSRPSMSTAQPIRAKKRSGAPSASN"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Serine protease"
                    }
                  },
                  location int {
                    from 0,
                    to 467,
                    id gi 067065065076254081
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25409", version 1}, gi 067065065076254091
          },
          descr {
            title "MAG: RNA dependent RNA polymerase [Viruses]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 505,
            seq-data iupacaa "MCSASLLRKRSFVFGGRPVSSSRGRVWRGSTEAPAGFRCISSIPGTAT
HKGSFVSRRLQHALEERVASCPELQRSWITAINEYSPADTSQEAEWSSFCIQLNEAAERRKTIEAPNEAEIEAVTTVL
EDFYKTAMCKPVSSLWNSRQNFEQLLMTLDNSSAPGYPYQREAPTIGXWLKIVDGMPNIVQVERLWYDVQLVMRGEYD
HIFRAFVKDEPHKASKVKAGKWRLIIASSLPVQMVWRMLYFSQNEALNASSSTIPSKHGFVFCYGGWRRFLAMAKTKG
ITISRDISAWDVNAPGWVFKVVGRLRARWSGVDDEWRRVHNMLYTDAYEDSRILFSNGLIVKQLFQGFMKSGLFNTIT
DNSMAMVAMHILACLRSNSIIGQIFATGDDVVQEVCSDEYLSVLEKLGCRVKELINHIEFMGLSFRTGKPEPLYVAKH
MVNFMCKEGLEKEVLDSYCRNYAESEYFDFWHGLAKSLGIQLPSRSYYRFWMSSPLAQHVAAARLMM"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  location int {
                    from 0,
                    to 504,
                    id gi 067065065076254091
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254081,
              location int {
                from 38,
                to 1444,
                strand plus,
                id gi 0670650651117301
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254091,
              location int {
                from 1141,
                to 2658,
                strand plus,
                id gi 0670650651117301
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            }
          }
        }
      }
    }
  }
}