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Durnavirales isolate Culex/Museum12/2023/Durnavirus:segment:1 RdRp (RdRp) gene, partial cds.

Accession:
C_AA111733.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Durnavirales",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum12/2023/Durnavirus:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111733", version 1}, gi 0670650651117331
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1421,
            topology linear,
            strand ss,
            seq-data ncbi2na 'B5C4CA02083A3FA1023FAD49C25F45B17E1FDC9D7F24A00F
E028BA1ED1F9FCB488E33C200338BD02D348161E17FCCD082401B604F9B9FF3BC8C25EC50E3D17
038EDFD28A37D437A2F4D97A9F53A390E68CC81020E13DB66156198D0D93CA47DE9320F03BF608
2C4DC5A1EFB933B991113EF89BA62100B5B92EEABCD6906B85FE9824B3F91D55E3D09B3082A28C
D73E6CE8FE21E9067AFB0823BD4EB382A444F17E83E3F452FF8C215F514E9EB751A5FE131E9730
4F8FF711CD8891A0F9DBB40D0EB533BD06F3C28F194F04600C64EEC3A2023330200BADF90BA0BC
7F1127EFA4BBFB07179D7C7CE539D49D0ED80D0E135DB7FAE18F633C9EF04012D4548E3B9082FF
9F5DC84E1ED0ED080D29D0B03137407E17F7E9C4237B8EA3141D88DA8004BF9A63EEE9781A5E30
B9EA18EF9346FBFE93CEC6407FA2E8D5B6F87DEBB20ABED0FF215F6175138522341023DFA37DEA
1C0141C4BD410E4637F440A369F5E92DC097FA00'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1410,
                    strand plus,
                    id gi 0670650651117331,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1410,
                    strand plus,
                    id gi 0670650651117331,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25412", version 1}, gi 067065065076254121
          },
          descr {
            title "MAG: RdRp, partial [Durnavirales]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 469,
            seq-data iupacaa "SYIGKKNGFGQRFGPAKPSPYLDFLAPLAGKFERSGLSLALVRDDIKK
NMSSKSSEPTDLLYQEAKRRTLRAFMLDKPVPMIHLNDVFQEDLPIWSSSPGLPWMQCGYRTKNDIRRDPDAINRIRH
FWHRIKCFEEVHLPDCCAYVRTHIVERGETKVRAVWGYPATVTFGEAVFALPLIQAYKKGGYPIAYGFETGNAGCKKM
FHGMKGTHYLGIDFTSFDKTLPPWLVSTAFDILAYNIDFLHYREHGIARVKSMVHMFNVIKDYAINTKIRMCNGERYI
KKSGLASGSYFTQLVGSVCNYLLLTYAMLQLNVEINDILVFGDDSILAVNKTVHPDDVQEVLLPLDMTVNVKKSGSSK
YISNLTFLGYKICDGIPTRDREKQFAAIVWPERPDKCWDDVASRCFGIMYANFGVDPVVDFWCRRVVNFRPFDLHMTR
DQQRFLDLLGLKPTTVPTMHDLSQRIGFLAV"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RdRp"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 468,
                    id gi 067065065076254121,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076254121,
              location int {
                from 0,
                to 1410,
                strand plus,
                id gi 0670650651117331,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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