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Quaranjavirus isolate Culex/Museum12/2023/Quaranjavirus-2:segment:1 PB2 (PB2) gene, partial cds.

Accession:
C_AA111740.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Quaranjavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum12/2023/Quaranjavirus-2:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111740", version 1}, gi 0670650651117401
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1027,
            topology linear,
            strand ss,
            seq-data ncbi4na '841844122282441821441222842214888212228248812221
144111884288188882422124248828288284282842121844822484882821222814184282448412
822248822814184184818424141142824412441884284288442148814124244414244128882184
121841441414288824124144421214882414414841424822148218884284841188421414142284
414848121144124812811411422818184442822288422282144844841144822114484284848822
8222221141144224418414184821841118421111221482411224111188281212281248444214FF
FFFFFFFFFFFFFFFF48182414442112128121248884822444124411424282814111421821114212
214244428214442828222821214114822888421441884284828821821142121418444224841441
144414448844141441842421144111212141184124841141141412228444188882841244144821
424142841218884112184118188841414214881442841484111428824411824824118821822214
144842241282418822221848182421441224841841188442222821821148184114414488281821
821114844121142244121142822284842844124141284242842844121421842842844841422182
841282282844221118841441141844828848888121841121184121188128484141844814142444
21812211412418844414844114112414442182141410'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "PB2"
                  },
                  partial TRUE,
                  location int {
                    from 206,
                    to 1026,
                    strand plus,
                    id gi 0670650651117401,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "PB2"
                  },
                  partial TRUE,
                  location int {
                    from 206,
                    to 1026,
                    strand plus,
                    id gi 0670650651117401,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "PB2"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25422", version 1}, gi 067065065076254221
          },
          descr {
            title "MAG: PB2, partial [Quaranjavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-right
            }
          },
          inst {
            repr raw,
            mol aa,
            length 273,
            seq-data iupacaa "MRRAFDEGTVRGVSVQSFAVNCREPGVYKDVLRSLYGLPCPQVVKVQG
AVFLPQEGRMRCHEMQNQSNRKFYTYVGXXXXXXXYRGQHYTFVRDGSALESIKAPAGSGLSLTEVLCRIAVFIKHRW
AVRKGGLERMRKETQNDVKKRPWDFLTEVSELTFEHEYLRAVRLSESFGIVEFIPEVPTRFPMYRRTVMNWPLIKYEG
GSIIKVDKPDKLPVLDETALLDSMLLVSHLTPLAKLRKMVLFYMNNDNYCEMVERAYQDDWEWKNEGIR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "PB2"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 272,
                    id gi 067065065076254221,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076254221,
              location int {
                from 206,
                to 1026,
                strand plus,
                id gi 0670650651117401,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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