Quaranjavirus isolate Culex/Museum12/2023/Quaranjavirus-2:segment:1 PB2 (PB2) gene, partial cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
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subtype new,
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},
data entrys {
set {
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descr {
source {
org {
taxname "Quaranjavirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum12/2023/Quaranjavirus-2:segment:1"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
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label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
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{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111740", version 1}, gi 0670650651117401
},
descr {
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{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
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molinfo {
biomol genomic
},
user {
type str "Submission",
data {
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label str "AdditionalComment",
data str "GenBase"
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},
inst {
repr raw,
mol rna,
length 1027,
topology linear,
strand ss,
seq-data ncbi4na '841844122282441821441222842214888212228248812221
144111884288188882422124248828288284282842121844822484882821222814184282448412
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},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "PB2"
},
partial TRUE,
location int {
from 206,
to 1026,
strand plus,
id gi 0670650651117401,
fuzz-to lim gt
},
xref {
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}
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},
{
id local id 3,
data rna {
type mRNA,
ext name "PB2"
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xref {
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data gene {
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{
id local id 1
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},
seq {
id {
genbank { accession "C_AAL25422", version 1}, gi 067065065076254221
},
descr {
title "MAG: PB2, partial [Quaranjavirus]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-right
}
},
inst {
repr raw,
mol aa,
length 273,
seq-data iupacaa "MRRAFDEGTVRGVSVQSFAVNCREPGVYKDVLRSLYGLPCPQVVKVQG
AVFLPQEGRMRCHEMQNQSNRKFYTYVGXXXXXXXYRGQHYTFVRDGSALESIKAPAGSGLSLTEVLCRIAVFIKHRW
AVRKGGLERMRKETQNDVKKRPWDFLTEVSELTFEHEYLRAVRLSESFGIVEFIPEVPTRFPMYRRTVMNWPLIKYEG
GSIIKVDKPDKLPVLDETALLDSMLLVSHLTPLAKLRKMVLFYMNNDNYCEMVERAYQDDWEWKNEGIR"
},
annot {
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data ftable {
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data prot {
name {
"PB2"
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},
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}
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annot {
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data ftable {
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id local id 1,
data cdregion {
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code {
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strand plus,
id gi 0670650651117401,
fuzz-to lim gt
},
xref {
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id local id 2
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id local id 3
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}