Marafivirus isolate Culex/Museum13/2023/Marafivirus Polyprotein (Polyprotein), p43 (p43), and Viral helicase (helicase) genes, complete cds; and hypothetical protein no blastphit (ORF10three) gene, partial cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Marafivirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum13/2023/Marafivirus"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111754", version 1}, gi 0670650651117541
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 6013,
topology linear,
strand ss,
seq-data ncbi2na 'FBFE92CE3E244AB9B879366383AEFF9042FC8FBFD4FFBFC0
8AFF8CD16C38CEDC3F02C091123F7C2A007BD1FC7F03C84CD3C6B8CD005DFC0100E8010DC07EF9
00453D366392D1915EE7434C794010D950DDE41DDD7CE23A10A31EED9EF99DF1A8D9E5D8146815
2D515D357D4401CF8014DE7B3413E81CDD9448D1D27B5CF4E095D42F4609D410E41993FE293E44
1C41F45580865119C5502DDD11F352091019EF4F46199D3B3F89F6B42D9617FF8031541EF8083F
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58D6EA039973E644A47B67D548B9FC042BF2675556D115264803F00D4DBA09EDB55967B954000F
541DD05BB41E1D15B7EBE340594104743E483B6102749E6677D08A3DF49EDA1535F5FD66073D9E
27C3B574034241FD784298667FC3D207540DC580840FFB7BF8F7E7581DF2841594178FF4385D35
5C7D581D12741AD68107A2CEBF7616145EBED339E8C08236036DB11DE02EB87DDDEAD65E9D0721
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16468E76599420FE1850CE0018B38E830E1660676463BE565043C7FD39763DDCB61165DDB010B5
77ED4DD96BFD7AF9A42DD359D092F4C3800CAA0D87D02FBAF5059E2F1B2E0E82D61740349ACD8E
5E9BB7517A81D91C5405BB67FFAD3E180FC42756069C7E8DF91D7F4067DED81FB6C37EA614394A
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0AFD349D4B6001418B67D40DD1491D295D9C8A5DB613834489FE1CED75DD0A3E1DD0E05A7BCF44
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4BF1B29F21CD012F93535F775BC1BE35F7D4088037A28349DD4343D5917A1655B7ECEB110524DD
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38F54562E1D7D83F8659DDF658BB341381871E507090801D090774DD41D0164B85587A6511FDBD
A37D1C01D24C27C3D4104FEA987A024ED01BE95F3908FCB6E7477EB52C000CD264DFD1D5095D64
904FF5DCEBAC01564127DD17DBD0433FD8DC1DB62EE8038F11E5F6140B49DAE29DE43E80F08039
061D0CD59B80F3E1F53751340141762DD07E85FC17B399F47A605691F18610758F10DD9ED77D15
FF6134726096E72ED298E1D7935159C597775DDAE894BE80369C6DF4BD01F073140457FBFE4BC7
D711409A4CB999D7867FBFE4024D36788642181F46100E9C9C4D9E2F6436B4F7FA88417FA8AC7D
77E04137BD43195FF61F7FDD86A555981D0AD79D01FA418D51F40E2CDB5F105D74008085B36676
C08067F97E8055E080465F63E39B8AF42BF3E700438435109C31103720E823BDD74776D5FD3678
40B67DFEB43457D435A01D45053D15F7AC70C3B625EFDCF5CD6F6497BD58A60D6D00217221AAFB
5D5FD491771CE3F27AC3809AC71B51477C780F9E7BC00DD342C716419D87EC81F824BDFCE7DE5A
49B41155B443637A5E8516784D1EFAC08EF7751D4AE81D9F44FABA1D0ED181AE949C5FB5DC4713
4154D3429D43E5FD1865519743B37F5142544200F8135D9769BFE74D0A900F9EF8475E73F3493C
2BD3678FDF50F134ED4480FFB415DBD9A2FCD07647D04361DB4D909AB73CFD5055DD7DB8989FDC
F445DCD186D56DC44C4187D76FF69456513F6119001D48BFBE5D88357F7857F69CF3FA3540'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "Polyprotein"
},
location int {
from 227,
to 5017,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Polyprotein"
},
location int {
from 227,
to 5017,
strand plus,
id gi 0670650651117541
},
xref {
{
data gene {
locus "Polyprotein"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "p43"
},
location int {
from 1035,
to 1307,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "p43"
},
location int {
from 1035,
to 1307,
strand plus,
id gi 0670650651117541
},
xref {
{
data gene {
locus "p43"
}
},
{
id local id 4
}
}
},
{
id local id 8,
data gene {
locus "helicase"
},
location int {
from 5014,
to 5712,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 7
}
}
},
{
id local id 9,
data rna {
type mRNA,
ext name "Viral helicase"
},
location int {
from 5014,
to 5712,
strand plus,
id gi 0670650651117541
},
xref {
{
data gene {
locus "helicase"
}
},
{
id local id 7
}
}
},
{
id local id 11,
data gene {
locus "ORF10three"
},
partial TRUE,
location int {
from 5743,
to 6012,
strand plus,
id gi 0670650651117541,
fuzz-to lim gt
},
xref {
{
id local id 10
}
}
},
{
id local id 12,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
partial TRUE,
location int {
from 5743,
to 6012,
strand plus,
id gi 0670650651117541,
fuzz-to lim gt
},
xref {
{
data gene {
locus "ORF10three"
}
},
{
id local id 10
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25438", version 1}, gi 067065065076254381
},
descr {
title "MAG: Polyprotein [Marafivirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 1596,
seq-data iupacaa "MENNLNLLQNTIHRDAVTHPVLNHTAKTIAQSLQLSPYEMDKDTVSLL
RSYGIAASNHGTQSHPHPFHKTIENHLLYQHWNYLATDHSAVLFMKPSKFTKLQQCNAHFEALHNYNFTPKDATRYPK
VSHTYPEAQTLFIHDALMYLSFGQVADLFENTPTVERIFASLVLPVESAFSLPSFHPQLYDYHIDSNYLYYKLERNPT
AAYKQPVDALKWLSTAYFVVSGKPYSITILESWGPVHSLLITRGAQPNDVVSFQTPLSVLIPTPTNVTLDLPARLVPR
KVYIAFFNYLRAVRSLRPADAYAFVRNSLNSSEYNWVSPAAWEQLAHFGLDTHAARPFTTYGPLFSLFSRLWAQARRL
GLNLLPKLSVHALFTFAVTTVARWLRLRFLSAGAWIAFIAHTAYLFNEHRTDVGRNREHLSYFHPDPWEMRLLRTGTV
ASPECFKQGLALPPVTPSAENLKSIVEAVVPAAVPQKNSQLSTVSTDSPVLVDQTANNTQLQNVDKAQLRALQEDSSA
VGPILPFRELFAELNVPQNQATFLTRRRAFNSELPNLPKDKFCLFDSCSELLGQPANLIFNDLIPYFPNSQLNGPEQL
EYGFSTDHLVVICWIKKIEIVVHSESGDFSLGPPGSTRHHLYHTPGHWSALPPQSEPPKLVGSGIPSLAQKLLSFKSP
DGHLLPFHTVHQYRTDARRAKNLTTNMKNEYDGIMTANARTMLPANNYFSCLDSLVDTASRKQVPLVHLAGFPGCGKS
HPLKQFIMKNRGIDFKVVVPTAELRSEWKSDLKISGIDAWRVSTWELALPKPCRFLVIDEIYKLPNGYLDLALLSNAS
VELVVILGDQCQGSYHSTHPASDNHLLIPETVHLQSYRDYYCLWTHRLFQSVARVLHVKSYSKIEGFISSSRKTNESL
PNLTSTQALARGLVDMNHRALTMSSSQGLTLNEPAVIHIDRYASNLSKGVSLVALTRSRAGLIFTGAFDELASTTCSN
TLFYECLRHGSAPFATHFAKELAGSIILTEPLTSRQRSPKLLGASSLPLLLSNKTKTPVIISDHLTYAAPLPDLPIPD
REISFLPPSRLLLHRSLPSALCTPVTESFVVMPPTPPEPVYVGLDYQTVASILLSVNVDPSSKEKIWRNQLSNQFPHL
DRPVLYGTQPASLLAPIHNEKKDPTLLPLSIPKRLRFRPTDASYVITTEDREIGNILFESWCFAHDSHPSDSFEFDAA
LFAECINMNDYCQLSKKTQATLISNSNRSDPDWRHTFVRIFTKTQHKLNSNNIWGDWKACQTLALMQDLVVLTLGPVK
KYQRIFHSQALRSNIFLYGGKTPQQLLTFVQQYFRSNSSSVENDYTAFDQSQLGEALQLEIKKMQRLNIPREIIDFHL
HIKTNLESQLGPLTCMRFTGEPGTYDDNSDYNLAVLFTLFDITSEAVLVSGDDSCIHPLPPLSSRWSQLENRLRLQFK
LNYTKHPLFCSYFLHQSGIVRAPDALFCKSIIAETQDELHDKMASYIAEFAIGHSLGDNLWEVLPLEQHLFQYALFDF
FSRRAPRELKVLLKLGNDPTSNEYRPYNLLKKKDRIALVKKRFALETPEETRLRLMREVQGLLLKQ"
},
annot {
{
data ftable {
{
data prot {
name {
"Polyprotein"
}
},
location int {
from 0,
to 1595,
id gi 067065065076254381
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25439", version 1}, gi 067065065076254391
},
descr {
title "MAG: p43 [Marafivirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 90,
seq-data iupacaa "MSPWTCRPASCLAKCTLRSSIICVQCAPSDQPTRMLSSATRLILVSTT
GSPLPLGNNWLTSDWILMQLVRSPLTAHFSLSSPGSGLKHGD"
},
annot {
{
data ftable {
{
data prot {
name {
"p43"
}
},
location int {
from 0,
to 89,
id gi 067065065076254391
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25440", version 1}, gi 067065065076254401
},
descr {
title "MAG: Viral helicase [Marafivirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 232,
seq-data iupacaa "MTIHKLIHKSRMEDVLLTLVPFIADKVASLVNHPSNPETPPTIHPSGT
NNVEPVSIPIRSQPVPEANPSKRPRDGVVLPFQHLYYDLAGNESGTTSTTLTEIAAVKNLIKYYRNARLVELEAVLYA
SAGSVNTPVTIDLAWTTADITVGKDVLSTPGGTRFTLGGLNVTNGGQLPCPLHYINPIIKAPIAFHDAPRLNVSFHQA
HKKIEHPRLGVLLIKGKIAVDTPAIYQH"
},
annot {
{
data ftable {
{
data prot {
name {
"Viral helicase"
}
},
location int {
from 0,
to 231,
id gi 067065065076254401
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25441", version 1}, gi 067065065076254411
},
descr {
title "MAG: hypothetical protein no blastphit, partial
[Marafivirus]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-right
}
},
inst {
repr raw,
mol aa,
length 90,
seq-data iupacaa "MSTEILSTLVRGVYQLALQQSTRHRKRVYYFPTPLLRERAFYSHLYHD
VPVYTYNDFLVFGHPPHFDTQKLQSLLPRESLSDPFGYYLDP"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
partial TRUE,
location int {
from 0,
to 89,
id gi 067065065076254411,
fuzz-to lim gt
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076254381,
location int {
from 227,
to 5017,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076254391,
location int {
from 1035,
to 1307,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 5
},
{
id local id 6
}
}
},
{
id local id 7,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076254401,
location int {
from 5014,
to 5712,
strand plus,
id gi 0670650651117541
},
xref {
{
id local id 8
},
{
id local id 9
}
}
},
{
id local id 10,
data cdregion {
frame one,
code {
id 1
}
},
partial TRUE,
product whole gi 067065065076254411,
location int {
from 5743,
to 6012,
strand plus,
id gi 0670650651117541,
fuzz-to lim gt
},
xref {
{
id local id 11
},
{
id local id 12
}
}
}
}
}
}
}
}
}