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Marafivirus isolate Culex/Museum13/2023/Marafivirus Polyprotein (Polyprotein), p43 (p43), and Viral helicase (helicase) genes, complete cds; and hypothetical protein no blastphit (ORF10three) gene, partial cds.

Accession:
C_AA111754.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Marafivirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum13/2023/Marafivirus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111754", version 1}, gi 0670650651117541
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 6013,
            topology linear,
            strand ss,
            seq-data ncbi2na 'FBFE92CE3E244AB9B879366383AEFF9042FC8FBFD4FFBFC0
8AFF8CD16C38CEDC3F02C091123F7C2A007BD1FC7F03C84CD3C6B8CD005DFC0100E8010DC07EF9
00453D366392D1915EE7434C794010D950DDE41DDD7CE23A10A31EED9EF99DF1A8D9E5D8146815
2D515D357D4401CF8014DE7B3413E81CDD9448D1D27B5CF4E095D42F4609D410E41993FE293E44
1C41F45580865119C5502DDD11F352091019EF4F46199D3B3F89F6B42D9617FF8031541EF8083F
D9F77EE754B60D66FF7794DFD45741DC63CD1361D03CDDC7109D8190541279B101056D867F80E9
FDC49F1F6DB77A00571D4D1CD762D3AAD5B9125FF0D1D9A654940E1BEEDFD4075DD26F78D50754
70ED17E85E5A565DB97640BB13E6F7D0F379B92E675748525866CE7F6D641D9F0F72E2C41EADD5
7967EA043E9D1F68FA31D39276D6F451F1A547FDDDDF7529DEA7424698F2B74377E5C0749B9191
DF46FE4B471ED94AE9D6DD63F7F592997A366F4F9D1124CDDF438136458EFA5B0DB811F89CFD45
58D6EA039973E644A47B67D548B9FC042BF2675556D115264803F00D4DBA09EDB55967B954000F
541DD05BB41E1D15B7EBE340594104743E483B6102749E6677D08A3DF49EDA1535F5FD66073D9E
27C3B574034241FD784298667FC3D207540DC580840FFB7BF8F7E7581DF2841594178FF4385D35
5C7D581D12741AD68107A2CEBF7616145EBED339E8C08236036DB11DE02EB87DDDEAD65E9D0721
14DDC51154AD1E8B9FE5964B78175C072EA34A4D5F57E44027DC27D08B523AD1F9F5BD444B934B
16468E76599420FE1850CE0018B38E830E1660676463BE565043C7FD39763DDCB61165DDB010B5
77ED4DD96BFD7AF9A42DD359D092F4C3800CAA0D87D02FBAF5059E2F1B2E0E82D61740349ACD8E
5E9BB7517A81D91C5405BB67FFAD3E180FC42756069C7E8DF91D7F4067DED81FB6C37EA614394A
ADF34751D3527D610D3F1F3D6805B51F90D716E1CF1EDDE8745B77D436B2622E7D1B402712C032
0AFD349D4B6001418B67D40DD1491D295D9C8A5DB613834489FE1CED75DD0A3E1DD0E05A7BCF44
F8D9CE5D417F702BBB5FAF95D1DBDD996B7CDF47A24F6181D9F5107E4904473FC60EDF651A349D
7FE51D1FE7020765A373CF747897F862D941B2D403E76B974D9C5DF79DD010850075ED34DDE345
D1B39265DD5E37D53578DA88FD7D7575776FEFBC458D5D5F797CE475EC1622FDB2C39454451789
4BF1B29F21CD012F93535F775BC1BE35F7D4088037A28349DD4343D5917A1655B7ECEB110524DD
E76754F4C38820215467DC51FD4F50065F67F6541E39F6C6D3451608DB80FA4135EF62D7AEFF9D
38F54562E1D7D83F8659DDF658BB341381871E507090801D090774DD41D0164B85587A6511FDBD
A37D1C01D24C27C3D4104FEA987A024ED01BE95F3908FCB6E7477EB52C000CD264DFD1D5095D64
904FF5DCEBAC01564127DD17DBD0433FD8DC1DB62EE8038F11E5F6140B49DAE29DE43E80F08039
061D0CD59B80F3E1F53751340141762DD07E85FC17B399F47A605691F18610758F10DD9ED77D15
FF6134726096E72ED298E1D7935159C597775DDAE894BE80369C6DF4BD01F073140457FBFE4BC7
D711409A4CB999D7867FBFE4024D36788642181F46100E9C9C4D9E2F6436B4F7FA88417FA8AC7D
77E04137BD43195FF61F7FDD86A555981D0AD79D01FA418D51F40E2CDB5F105D74008085B36676
C08067F97E8055E080465F63E39B8AF42BF3E700438435109C31103720E823BDD74776D5FD3678
40B67DFEB43457D435A01D45053D15F7AC70C3B625EFDCF5CD6F6497BD58A60D6D00217221AAFB
5D5FD491771CE3F27AC3809AC71B51477C780F9E7BC00DD342C716419D87EC81F824BDFCE7DE5A
49B41155B443637A5E8516784D1EFAC08EF7751D4AE81D9F44FABA1D0ED181AE949C5FB5DC4713
4154D3429D43E5FD1865519743B37F5142544200F8135D9769BFE74D0A900F9EF8475E73F3493C
2BD3678FDF50F134ED4480FFB415DBD9A2FCD07647D04361DB4D909AB73CFD5055DD7DB8989FDC
F445DCD186D56DC44C4187D76FF69456513F6119001D48BFBE5D88357F7857F69CF3FA3540'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "Polyprotein"
                  },
                  location int {
                    from 227,
                    to 5017,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Polyprotein"
                  },
                  location int {
                    from 227,
                    to 5017,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      data gene {
                        locus "Polyprotein"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "p43"
                  },
                  location int {
                    from 1035,
                    to 1307,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "p43"
                  },
                  location int {
                    from 1035,
                    to 1307,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      data gene {
                        locus "p43"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "helicase"
                  },
                  location int {
                    from 5014,
                    to 5712,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "Viral helicase"
                  },
                  location int {
                    from 5014,
                    to 5712,
                    strand plus,
                    id gi 0670650651117541
                  },
                  xref {
                    {
                      data gene {
                        locus "helicase"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 11,
                  data gene {
                    locus "ORF10three"
                  },
                  partial TRUE,
                  location int {
                    from 5743,
                    to 6012,
                    strand plus,
                    id gi 0670650651117541,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 10
                    }
                  }
                },
                {
                  id local id 12,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  partial TRUE,
                  location int {
                    from 5743,
                    to 6012,
                    strand plus,
                    id gi 0670650651117541,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF10three"
                      }
                    },
                    {
                      id local id 10
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25438", version 1}, gi 067065065076254381
          },
          descr {
            title "MAG: Polyprotein [Marafivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 1596,
            seq-data iupacaa "MENNLNLLQNTIHRDAVTHPVLNHTAKTIAQSLQLSPYEMDKDTVSLL
RSYGIAASNHGTQSHPHPFHKTIENHLLYQHWNYLATDHSAVLFMKPSKFTKLQQCNAHFEALHNYNFTPKDATRYPK
VSHTYPEAQTLFIHDALMYLSFGQVADLFENTPTVERIFASLVLPVESAFSLPSFHPQLYDYHIDSNYLYYKLERNPT
AAYKQPVDALKWLSTAYFVVSGKPYSITILESWGPVHSLLITRGAQPNDVVSFQTPLSVLIPTPTNVTLDLPARLVPR
KVYIAFFNYLRAVRSLRPADAYAFVRNSLNSSEYNWVSPAAWEQLAHFGLDTHAARPFTTYGPLFSLFSRLWAQARRL
GLNLLPKLSVHALFTFAVTTVARWLRLRFLSAGAWIAFIAHTAYLFNEHRTDVGRNREHLSYFHPDPWEMRLLRTGTV
ASPECFKQGLALPPVTPSAENLKSIVEAVVPAAVPQKNSQLSTVSTDSPVLVDQTANNTQLQNVDKAQLRALQEDSSA
VGPILPFRELFAELNVPQNQATFLTRRRAFNSELPNLPKDKFCLFDSCSELLGQPANLIFNDLIPYFPNSQLNGPEQL
EYGFSTDHLVVICWIKKIEIVVHSESGDFSLGPPGSTRHHLYHTPGHWSALPPQSEPPKLVGSGIPSLAQKLLSFKSP
DGHLLPFHTVHQYRTDARRAKNLTTNMKNEYDGIMTANARTMLPANNYFSCLDSLVDTASRKQVPLVHLAGFPGCGKS
HPLKQFIMKNRGIDFKVVVPTAELRSEWKSDLKISGIDAWRVSTWELALPKPCRFLVIDEIYKLPNGYLDLALLSNAS
VELVVILGDQCQGSYHSTHPASDNHLLIPETVHLQSYRDYYCLWTHRLFQSVARVLHVKSYSKIEGFISSSRKTNESL
PNLTSTQALARGLVDMNHRALTMSSSQGLTLNEPAVIHIDRYASNLSKGVSLVALTRSRAGLIFTGAFDELASTTCSN
TLFYECLRHGSAPFATHFAKELAGSIILTEPLTSRQRSPKLLGASSLPLLLSNKTKTPVIISDHLTYAAPLPDLPIPD
REISFLPPSRLLLHRSLPSALCTPVTESFVVMPPTPPEPVYVGLDYQTVASILLSVNVDPSSKEKIWRNQLSNQFPHL
DRPVLYGTQPASLLAPIHNEKKDPTLLPLSIPKRLRFRPTDASYVITTEDREIGNILFESWCFAHDSHPSDSFEFDAA
LFAECINMNDYCQLSKKTQATLISNSNRSDPDWRHTFVRIFTKTQHKLNSNNIWGDWKACQTLALMQDLVVLTLGPVK
KYQRIFHSQALRSNIFLYGGKTPQQLLTFVQQYFRSNSSSVENDYTAFDQSQLGEALQLEIKKMQRLNIPREIIDFHL
HIKTNLESQLGPLTCMRFTGEPGTYDDNSDYNLAVLFTLFDITSEAVLVSGDDSCIHPLPPLSSRWSQLENRLRLQFK
LNYTKHPLFCSYFLHQSGIVRAPDALFCKSIIAETQDELHDKMASYIAEFAIGHSLGDNLWEVLPLEQHLFQYALFDF
FSRRAPRELKVLLKLGNDPTSNEYRPYNLLKKKDRIALVKKRFALETPEETRLRLMREVQGLLLKQ"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Polyprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 1595,
                    id gi 067065065076254381
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25439", version 1}, gi 067065065076254391
          },
          descr {
            title "MAG: p43 [Marafivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 90,
            seq-data iupacaa "MSPWTCRPASCLAKCTLRSSIICVQCAPSDQPTRMLSSATRLILVSTT
GSPLPLGNNWLTSDWILMQLVRSPLTAHFSLSSPGSGLKHGD"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "p43"
                    }
                  },
                  location int {
                    from 0,
                    to 89,
                    id gi 067065065076254391
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25440", version 1}, gi 067065065076254401
          },
          descr {
            title "MAG: Viral helicase [Marafivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 232,
            seq-data iupacaa "MTIHKLIHKSRMEDVLLTLVPFIADKVASLVNHPSNPETPPTIHPSGT
NNVEPVSIPIRSQPVPEANPSKRPRDGVVLPFQHLYYDLAGNESGTTSTTLTEIAAVKNLIKYYRNARLVELEAVLYA
SAGSVNTPVTIDLAWTTADITVGKDVLSTPGGTRFTLGGLNVTNGGQLPCPLHYINPIIKAPIAFHDAPRLNVSFHQA
HKKIEHPRLGVLLIKGKIAVDTPAIYQH"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Viral helicase"
                    }
                  },
                  location int {
                    from 0,
                    to 231,
                    id gi 067065065076254401
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25441", version 1}, gi 067065065076254411
          },
          descr {
            title "MAG: hypothetical protein no blastphit, partial
 [Marafivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-right
            }
          },
          inst {
            repr raw,
            mol aa,
            length 90,
            seq-data iupacaa "MSTEILSTLVRGVYQLALQQSTRHRKRVYYFPTPLLRERAFYSHLYHD
VPVYTYNDFLVFGHPPHFDTQKLQSLLPRESLSDPFGYYLDP"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 89,
                    id gi 067065065076254411,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254381,
              location int {
                from 227,
                to 5017,
                strand plus,
                id gi 0670650651117541
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254391,
              location int {
                from 1035,
                to 1307,
                strand plus,
                id gi 0670650651117541
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254401,
              location int {
                from 5014,
                to 5712,
                strand plus,
                id gi 0670650651117541
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            },
            {
              id local id 10,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076254411,
              location int {
                from 5743,
                to 6012,
                strand plus,
                id gi 0670650651117541,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 11
                },
                {
                  id local id 12
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析