Partitiviridae isolate Culex/Museum13/2023/partiti-like_virus:segment:1 RNA dependent RNA polymerase (RdRp) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Partitiviridae",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum13/2023/partiti-like_virus:segment:1"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111756", version 1}, gi 0670650651117561
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1389,
            topology linear,
            strand ss,
            seq-data ncbi2na '8ECF1BC36F722BFE8399501B15615D54CE44277BFA220BDD
C79DB23683E2BF2FC3420E13BE08EA350D610F3DB8E183FA33B2C6E497A8C2F4BB8752E0543517
818CDFE33A3FA13D90B5255A1D5BA4944B108666982F3A1ED4867284D8D619C7A4593C29288217
845E38F90AEFB36644CD4888E058235892ECE8CD61E7344F8E8A4E7F91D5FE3618B1080A02196F
A7C68C613A6BEBA25C40759DDB3420B3633F68ECD8FDD09F63084B36992F8C08C93FD4C760481B
A13186314024EB3148642C87B1624EA1C5CB82CFF7A21D675AFBB06980AE820829EBBD42E8D71F
4549FBE1D4DBC3E8FF8D07393D74223DA0A394823E5EB7FA638F6B2ED490C947DD9E8A230BA507
B6827A4E16E06F8C2D4DC44179B6382E8BF768FCA320AEBFD5EDB25D80AE8E8A77B14D48BA5218
A3EA13BD94B6A5F2AFBDC66066A2E0EA4BFD523396C13ECA2F6E6FC630375762112764EF1A0DDA
4C28F1E3E7454F7977578AC0'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "RdRp"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1388,
                    strand plus,
                    id gi 0670650651117561,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "RNA dependent RNA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1388,
                    strand plus,
                    id gi 0670650651117561,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "RdRp"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25451", version 1}, gi 067065065076254511
          },
          descr {
            title "MAG: RNA dependent RNA polymerase, partial [Partitiviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-ends
            }
          },
          inst {
            repr raw,
            mol aa,
            length 463,
            seq-data iupacaa "MYYVNRSRGFGMRPNVPRPSPYAQALFGEKFSTARRSELRFSLIKNDM
LKMGSNPTIIRDDEFGYVVRAAWDKFSVTPVNPIHLNDIFDMDLDIRKSSPGLPWQPQYKTRGEVMDCPDARTSIRRY
WHRIKAGEDLTPDDCKVLYRAHIQRDEPKIRAVYGYPTAITLMEACFALPLIDEYKKGKTPLAYGYDMAVGGAYKLRS
RIKKYRYFGCIDFSSFDKTVSAQLIKIAFSILEQNVDIRRYQKHGIPDASRLYRAWDYLVKYFLETPLRLCNGERWKK
KAGVPSGSYFTQLVDSIVNWILINYAFLKRFGRMPEDCLVFGDDSVVSSNSHFSLEEISGQLSEAGMTVNVDKSIYTT
CVDEVEFLGFRIEGGFPCRSLERWMEALYHPEWPDEDWDMFASRALGLFYANAGVNGQFSQICRNIVGVRAFTINLPR
DTARMLRNLGIRITDCSPILPLPEV"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "RNA dependent RNA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 462,
                    id gi 067065065076254511,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame two,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076254511,
              location int {
                from 0,
                to 1388,
                strand plus,
                id gi 0670650651117561,
                fuzz-from lim lt,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}