Riboviria isolate Culex/Museum13/2023/Tombus-like_virus:segment:2 Uncharacterized protein (ORF1), Capsid protein (capsid), and Uncharacterized protein (ORF2) genes, complete cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum13/2023/Tombus-like_virus:segment:2"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111758", version 1}, gi 0670650651117581
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1958,
            topology linear,
            strand ss,
            seq-data ncbi4na '488121181484848214828181121248148488118488114828
211821142811118188484411124888111128848211822182128141188812841124841128824141
828181811881221124814218844888811121248841818118111241128248281812411421818828
281184421288482114118881248148822124244828881128118888822488411828481422141424
28112182118882811824822288814888288188288842488148828112128112118882FFFFFF8122
121242128882128821828442114812488211822128148828488884448214882812128111818148
112412821112282444128188422124812481112112218242118112122182441888428821218281
121822181821428488488441828821488284284228818421422428821441884882848888282182
224414828142881888411812888488211424484881888281281818882114288111121224214422
248182812182188288188448488488288818188448448844422882214882811842218188181841
281821141488488441888844218841821188841828212818828228122118822111121828218488
288212181228122111181211222848844184218181812128221412811281218228241182841484
818288122124114184844221122188288211811148182814882184481844112141118844418184
881844118244111841828122881888218841811811882814811828841218211811818881828422
412841284481842148488211212121488122112418214421121112188241288212212212841844
112884821248812818114812121822248841844188442118218281828481844811811821818821
812842882181242148818122121818218121481281821828211811411418448841222141221424
241418811244211181884882112814118811812118241841118112111288482428144448241881
281822288848881841244812888122112822821111481284821118811188221122221211122122
128281822818482241211842184284441211112412121441812148414884228122111888222142
112184282122481211184412211882881282818822844814811188818188221118818841112488
118241281818888841148888811888818288881211828188288188228811141212888118212188
111848821188814188448841188828888188881818844188428211181288821182888111882128
818188882818218118888412288812218444118112124884121884128184188841212112181884
111111111181211212124118142124424228114848421118488828218221811282118484428422
81228122288184211224288121824412841812'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "ORF1"
                  },
                  location int {
                    from 207,
                    to 734,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Uncharacterized protein"
                  },
                  location int {
                    from 207,
                    to 734,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF1"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "capsid"
                  },
                  location int {
                    from 559,
                    to 1812,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein"
                  },
                  location int {
                    from 559,
                    to 1812,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 8,
                  data gene {
                    locus "ORF2"
                  },
                  location int {
                    from 734,
                    to 1159,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      id local id 7
                    }
                  }
                },
                {
                  id local id 9,
                  data rna {
                    type mRNA,
                    ext name "Uncharacterized protein"
                  },
                  location int {
                    from 734,
                    to 1159,
                    strand plus,
                    id gi 0670650651117581
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF2"
                      }
                    },
                    {
                      id local id 7
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25446", version 1}, gi 067065065076254461
          },
          descr {
            title "MAG: Uncharacterized protein [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 175,
            seq-data iupacaa "MALVKNLRSSTRSLTNFSVESVARALTSISNRPFSFLFFALVLTLTIS
XXTTRTFTSSGKYVQSTSSVLGQFYTKYSNDSNLGTIATYVNNHRNNTIGFASHLTSISAVVGSSVLLPYAAASGLFC
FLIPESSLFEYFVQAVLFLLYFKLKTPQARIYIILIGVVLYIGGWAFQF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Uncharacterized protein"
                    }
                  },
                  location int {
                    from 0,
                    to 174,
                    id gi 067065065076254461
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25447", version 1}, gi 067065065076254471
          },
          descr {
            title "MAG: Capsid protein [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 417,
            seq-data iupacaa "MQPLQDCSVFSSRSLAYLNTLFKRCYFYYISSLKHRRPVSTSFLLVLF
FILVVGPSSSNAILYDYQELLDFGIDQFDLTILLPIPKHLMFFTYLPKYNPVGCIYTLQTNYILESECILPRRCGQPF
FNKVSSSWYGTEIGICYGIGNDLPYFIDNNSSNLDINNIYLPTDWYAVFNTQLPTIRQQTFDFTTTDGTCHVTISTHP
VDGLAIIYLYGNNHIHTASYAVIPHIIQYYHLNKKMVDPDQREINGKYCSTRINTIDEITNLSLGVDYYPFVYDGTLP
TPQKYCQIKFQPHKPPLYPMSDNACWDKTTQDTVSCLPNFPATCSPYKWTNSYSIPGSKFIFQIIETLIDYIFEVFNF
IFYNLFLFLKDTLITLNVQFRLVEFLLFYIGLLKYFQSLNSLIFSIIILTFTMGITR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein"
                    }
                  },
                  location int {
                    from 0,
                    to 416,
                    id gi 067065065076254471
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25448", version 1}, gi 067065065076254481
          },
          descr {
            title "MAG: Uncharacterized protein [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 141,
            seq-data iupacaa "MPYYMTIKSCWILALINLISLFSYQFQNISCSSHTYQNTTLLDAYIHS
RLTTSSNLSVSYHEDVANHSSIKYLVHGMEQKLGYVMESEMIYLISLIIILVILTSIIFICRLTGMQCSTHSYQRSGN
KHSTSPPLMELVTLL"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Uncharacterized protein"
                    }
                  },
                  location int {
                    from 0,
                    to 140,
                    id gi 067065065076254481
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254461,
              location int {
                from 207,
                to 734,
                strand plus,
                id gi 0670650651117581
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254471,
              location int {
                from 559,
                to 1812,
                strand plus,
                id gi 0670650651117581
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            },
            {
              id local id 7,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254481,
              location int {
                from 734,
                to 1159,
                strand plus,
                id gi 0670650651117581
              },
              xref {
                {
                  id local id 8
                },
                {
                  id local id 9
                }
              }
            }
          }
        }
      }
    }
  }
}