Riboviria isolate Culex/Museum13/2023/partiti-like_virus:segment:Seg1 RdRp (RdRp) gene, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Riboviria",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum13/2023/partiti-like_virus:segment:Seg1"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111760", version 1}, gi 0670650651117601
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1651,
topology linear,
strand ss,
seq-data ncbi2na 'A390C5DAC0F23AFF0CE85E2175C83A3AEF1FBAB33818FAFE
88E6CEF862BCE6EFCD3237157DFF87CF808A3FCE03385B031BB502E3D88A2434CC03AF752DEC6E
343DBBCA2008C317F877EB9AEFE0DC204E1DD8C2D17A3C53A3106EACC2180A23B7F97B76095BD2
233F805EA16AFAC1A19A09B7C5231BB9BF388B12FA4020AC28023DB9EFEA9D17106B8D9E08A76F
DFDF5F33B409E091DE39173E6CDB9E03A416BA4ED3C3C38CEE50D1352A900CDC3878DCDE0FE108
9B165FA72C6239FD2CCB4E801FE1F6062F3E82E3AC0BFA86F0D77C8102219BF508E323C7D3431D
4BD873B0EB808CDB009A2BB17DE82CEE870CF3E31CFB8190F34B233ECDF411F4A0AF14FA78CECD
FA238D2FE4BEC86B3CD0DF8CB3747DE38280BF6B3ACF115E30BB3331E20D7D43B90F5FAF3FC164
3AFC5FA02A04EFDDBE6D8E37F5A26D6BC384338C6EFDD894FAD23BADC7793AE8427B08EBA04CBD
09CEF198FD0DE1CB0A3B6F9F33C08825E8DFF231F0239FACF84F4803683141C84EB8B137CA6F8D
75FA0B77D8DF10D4BC2EA336387C8DB6354B73E13A38BACE22FD0770E1E08F88E1700CE0E0E0'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "RdRp"
},
location int {
from 2,
to 1618,
strand plus,
id gi 0670650651117601
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "RdRp"
},
location int {
from 2,
to 1618,
strand plus,
id gi 0670650651117601
},
xref {
{
data gene {
locus "RdRp"
}
},
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25450", version 1}, gi 067065065076254501
},
descr {
title "MAG: RdRp [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 538,
seq-data iupacaa "MQYLGKLDGFNMDLRPPRMDGVTCGYMNDWFGDAYVDEVMRVYHRSTP
SFDLLKEDFMKYDRKYVSKVIREEQSYKMVLQSVRDQFVLGEKIIPLTLGAVFESKNMTLDKSPGLPWIQRGYKTKGD
VFACLEARSEIFETWDRVGNGRGSVLPDTCAFMRVQLAKEGKEKIRAVWGSPTTVIAEEARFFLPYMSKLKHSDAPIA
YRAEMATGGMSLINDMCQSHPGAKYLMTDLSEFDKSVPPWLVRDAFSIVMENFDFERVIGSDGKVWDVNPLRTKRRVS
KMIDYFINTPVRLCNGERYRKSGGVPSGSMWTNIIDTIVNAIISRYCIFNTSGRLPLADMYLGDDQFAVVDGIINLDS
ISLLMKESFGMVLHPDKCIYTENPSNVQFLGYFNRNGLPWKGNMFLVASMIFPERPVNDNMIRVSRAIGQMWSTLHGG
QAVRWWNIVQAMLRDFNLTSKDVVAYIKEKPGSFRYLKMLGIDIQKIGIPTRHGEYILGVDPPWKSLRSYNPVKWDID
DLDRRSQSIDMDEWYESFNSND"
},
annot {
{
data ftable {
{
data prot {
name {
"RdRp"
}
},
location int {
from 0,
to 537,
id gi 067065065076254501
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076254501,
location int {
from 2,
to 1618,
strand plus,
id gi 0670650651117601
},
xref {
{
id local id 2
},
{
id local id 3
}
}
}
}
}
}
}
}
}