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Orbivirus isolate Culex/Museum13/2023/Orbivirus:segment:4 hypothetical protein no blastphit (ORF1three) gene, partial cds; and hypothetical protein no blastphit (ORF2) gene, complete cds.

Accession:
C_AA111766.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Orbivirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum13/2023/Orbivirus:segment:4"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111766", version 1}, gi 0670650651117661
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1535,
            topology linear,
            strand ss,
            seq-data ncbi2na '830F1F5C7EEA70C2C84D38360E6280FD6ED9F6B164A99629
C13814D05670F62D9FE9F9F808603D83D543428E80EF5F14E33AB807D133A8D7EF2CD6C6E96438
7F5719CA8907ADBE83278C64D41A3B6FF8C56086C02378208E0EE3FC24463D9E09E71F9B7DE918
E03F788F8402B7CDF365F9AD9D02838F80838A0D6A0B5A840C23F20E7DB3CECFF823583CFFD90F
4F2E3181C4E7C2388BD78E0F2777E1A0CD60EF023CF6B37173A127FEFA439F777D830F1D336230
AFEEB5173D8F8EFFEE9E883F4AF648F44E7BCEFC8F3FDE7F33818F830C3079874EFD80A33E3B6D
20D236CC5315B39FE8B4F4E1F40456333CB3DA589237FA3CE27EB4138EE9CA237A1C97A6C3EA04
C3CCDDD61BFB82AA038CFCEB6226616B8F3BA1315B97413EAB38BF2D428713FDD400A3C027908C
E84A90E1A9E3D99EF422018FD33E107BD0E38083930F84FE9F3E7206BD42FF881FF93039E7A3C7
067BB74F51A43EBE2CCF5608D22A1BE3CFF8C67EF6337FDA1120D8F6EECA8FF488DE12F534583F
7B02721E84B8A39F74'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "ORF1three"
                  },
                  partial TRUE,
                  location int {
                    from 40,
                    to 1534,
                    strand plus,
                    id gi 0670650651117661,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  partial TRUE,
                  location int {
                    from 40,
                    to 1534,
                    strand plus,
                    id gi 0670650651117661,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF1three"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "ORF2"
                  },
                  location int {
                    from 702,
                    to 920,
                    strand minus,
                    id gi 0670650651117661
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 702,
                    to 920,
                    strand minus,
                    id gi 0670650651117661
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF2"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25461", version 1}, gi 067065065076254611
          },
          descr {
            title "MAG: hypothetical protein no blastphit, partial [Orbivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-right
            }
          },
          inst {
            repr raw,
            mol aa,
            length 498,
            seq-data iupacaa "MNRMRGNFRVASVPQGAEANMNHQPANSSRFGLLERRNSNSPIKDGNV
PYHDMGETSHMGSLLVSVRGRNDFPYAREQLVVGIADTHPTDVVLIPEDVKDLKKMNVILSTRFAEAATCVFWHDEIS
EIDKRSYLIALRSLKGMIERMRNPGSPGQIRFRMLRIMYFEDPNYFSQFISDTNYMLKMRVPDELALLTEYPNVKDYS
VSTYGQLLLAMLLSSNNYSYRDKVCGPPIRLMFLWLENFRFADSHAVMFRLFSALYERLNNNNCDSCFERILMSSESD
RIPYPYALESFMTSNTRYISIRPSRSLDYELGQHDVARRSGLAWRNWEHNYISPTFVKGEMIFMVESATGDYVDIPVP
QHWGMSLVQGLHFLQKGLKAARYGQGNDGLIRAVQEKRFHIDNCSMMKECIIDIWLIARTVPSFENFCINAAGLLTLC
LIPRQLVEYIPEDQRDVDYFDTLVRYLFGHRIDSCVGIFRDLTVPSPNFCKARLDSEDAS"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 497,
                    id gi 067065065076254611,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25462", version 1}, gi 067065065076254621
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Orbivirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 72,
            seq-data iupacaa "MNDSKAYGYGIRSDSDDINILSKHESQLLLFNRSYKAENNLNITACES
ANLKFSSHKNINRIGGPQTLSRYE"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 71,
                    id gi 067065065076254621
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076254611,
              location int {
                from 40,
                to 1534,
                strand plus,
                id gi 0670650651117661,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254621,
              location int {
                from 702,
                to 920,
                strand minus,
                id gi 0670650651117661
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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