Orbivirus isolate Culex/Museum13/2023/Orbivirus:segment:4 hypothetical protein no blastphit (ORF1three) gene, partial cds; and hypothetical protein no blastphit (ORF2) gene, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Orbivirus",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum13/2023/Orbivirus:segment:4"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111766", version 1}, gi 0670650651117661
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1535,
topology linear,
strand ss,
seq-data ncbi2na '830F1F5C7EEA70C2C84D38360E6280FD6ED9F6B164A99629
C13814D05670F62D9FE9F9F808603D83D543428E80EF5F14E33AB807D133A8D7EF2CD6C6E96438
7F5719CA8907ADBE83278C64D41A3B6FF8C56086C02378208E0EE3FC24463D9E09E71F9B7DE918
E03F788F8402B7CDF365F9AD9D02838F80838A0D6A0B5A840C23F20E7DB3CECFF823583CFFD90F
4F2E3181C4E7C2388BD78E0F2777E1A0CD60EF023CF6B37173A127FEFA439F777D830F1D336230
AFEEB5173D8F8EFFEE9E883F4AF648F44E7BCEFC8F3FDE7F33818F830C3079874EFD80A33E3B6D
20D236CC5315B39FE8B4F4E1F40456333CB3DA589237FA3CE27EB4138EE9CA237A1C97A6C3EA04
C3CCDDD61BFB82AA038CFCEB6226616B8F3BA1315B97413EAB38BF2D428713FDD400A3C027908C
E84A90E1A9E3D99EF422018FD33E107BD0E38083930F84FE9F3E7206BD42FF881FF93039E7A3C7
067BB74F51A43EBE2CCF5608D22A1BE3CFF8C67EF6337FDA1120D8F6EECA8FF488DE12F534583F
7B02721E84B8A39F74'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "ORF1three"
},
partial TRUE,
location int {
from 40,
to 1534,
strand plus,
id gi 0670650651117661,
fuzz-to lim gt
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
partial TRUE,
location int {
from 40,
to 1534,
strand plus,
id gi 0670650651117661,
fuzz-to lim gt
},
xref {
{
data gene {
locus "ORF1three"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "ORF2"
},
location int {
from 702,
to 920,
strand minus,
id gi 0670650651117661
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "hypothetical protein no blastphit"
},
location int {
from 702,
to 920,
strand minus,
id gi 0670650651117661
},
xref {
{
data gene {
locus "ORF2"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25461", version 1}, gi 067065065076254611
},
descr {
title "MAG: hypothetical protein no blastphit, partial [Orbivirus]",
molinfo {
biomol peptide,
tech concept-trans,
completeness no-right
}
},
inst {
repr raw,
mol aa,
length 498,
seq-data iupacaa "MNRMRGNFRVASVPQGAEANMNHQPANSSRFGLLERRNSNSPIKDGNV
PYHDMGETSHMGSLLVSVRGRNDFPYAREQLVVGIADTHPTDVVLIPEDVKDLKKMNVILSTRFAEAATCVFWHDEIS
EIDKRSYLIALRSLKGMIERMRNPGSPGQIRFRMLRIMYFEDPNYFSQFISDTNYMLKMRVPDELALLTEYPNVKDYS
VSTYGQLLLAMLLSSNNYSYRDKVCGPPIRLMFLWLENFRFADSHAVMFRLFSALYERLNNNNCDSCFERILMSSESD
RIPYPYALESFMTSNTRYISIRPSRSLDYELGQHDVARRSGLAWRNWEHNYISPTFVKGEMIFMVESATGDYVDIPVP
QHWGMSLVQGLHFLQKGLKAARYGQGNDGLIRAVQEKRFHIDNCSMMKECIIDIWLIARTVPSFENFCINAAGLLTLC
LIPRQLVEYIPEDQRDVDYFDTLVRYLFGHRIDSCVGIFRDLTVPSPNFCKARLDSEDAS"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
partial TRUE,
location int {
from 0,
to 497,
id gi 067065065076254611,
fuzz-to lim gt
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25462", version 1}, gi 067065065076254621
},
descr {
title "MAG: hypothetical protein no blastphit [Orbivirus]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 72,
seq-data iupacaa "MNDSKAYGYGIRSDSDDINILSKHESQLLLFNRSYKAENNLNITACES
ANLKFSSHKNINRIGGPQTLSRYE"
},
annot {
{
data ftable {
{
data prot {
name {
"hypothetical protein no blastphit"
}
},
location int {
from 0,
to 71,
id gi 067065065076254621
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
partial TRUE,
product whole gi 067065065076254611,
location int {
from 40,
to 1534,
strand plus,
id gi 0670650651117661,
fuzz-to lim gt
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076254621,
location int {
from 702,
to 920,
strand minus,
id gi 0670650651117661
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}