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Iflaviridae isolate Culex/Museum13/2023/Iflavi-like_virus hypothetical protein no blastphit (ORF1) and polyprotein (polyprotein) genes, complete cds.

Accession:
C_AA111767.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Iflaviridae",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum13/2023/Iflavi-like_virus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111767", version 1}, gi 0670650651117671
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 9787,
            topology linear,
            strand ss,
            seq-data ncbi4na '181121118188881188888288281428812224814428188848
224114188112111818882128841888828114112418188121142882118248884211181182214282
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282248212288481821124144121112224148488188814848411121182844822111211411118484
818441181284881212211448842241481828411488448411841841884411448421144188441141
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844888141141842818811118218418844111888481841141218811444142814144184421844821
188844222881841414844181212118124141841248244848488288148141811118218411821122
118844482118188441818118111121248111441241111141811884411881241411411444111284
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112141411848112848448144142142841482148141141482818888112182188122214141888128
144888114882112841111448481841888212141841814842844418818482224888818422188441
112848411848142142812841842844888418811114884424818218141141888448811118811814
818112112188122218821144288818488144821881841888141188811188118842821144148422
121121142884888488118488444121884822811822181844828481841811188848282121421144
884412148141844142844844142112144812811881822448411422148881841412881841212181
288414848841142882148418414122811848421488414288141182121144141148812228211148
811421111181221211112818418824111888841881888411142282844112111822844818124844
844118421144888428212288121842828112222148218448144112844212814811811888841848
414118888488814188848421142811488444142818412141122148811441411112212814842824
881811821888481848148422821841888811441884441148428811148282821441222141148841
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118418412142148844148418841882818141444218212844181211211811411418811111211141
811122148441842848482821148212812218122814122824118411888812111844841444122841
882142848818148444118114884448841128112221818888121182888841441841122811182181
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411884411828421122112241844111284422228182822844121488842882881844481842811811
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848811112118488221811142282118841418842818814188844124841888412814811842818841
411882881848812818118211818121141812182142888841148821818822881818281841812822
212824222148182144882882112142448142228822811212112811822842811881842888842821
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188148181822122421448818882848212221144118812112822128121188842248848442414122
241812111848422111188288821421181812222814848881828842422111881848821144122841
814811124421812818288112211212841121888111888811182118828211118422148811118218
811881881882481841122884448811181211148111812148812141212141448141448182141214
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824182118818411841182111411188212412121412118424841111282241184488211844121828
842818184484811848111184811418882448888488411818444441841888841188444144188888
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812821144841141112122181282141821121141441112241111141144848182141842848811111
441148441442818128242141141841882148282141141818821112241181841811188118428141
184441111841121122148141411122188111222121148888848412821144441182444888828428
811441228112228882844484411482288411182818418148482812142148412812142842112888
442188211841148441814144242282442142888844142848142428281212284818444144148121
121188118224418811814112842841118414882141148248221441882148821142848124841412
812841441188142142411842118482441118811111218418141821188188822188888424882812
282141488818444282888184411818842821121888148821842142828142121111884414811842
142888842144888884848818418441118411188488141184411141884411111488484221122818
441188488888812814442121182288218212821144422141112284412882188142121148888112
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211884442888821441142841822111818842188188112842888121111821444441141888441141
888842442421142114841188828812188288842841888141148412811424841411814118211481
888142128118888424442818811118814141118228848114148411241822111118142144122828
188121112184848411148818141111142811882148121481288188421484841818848811421441
122188818888484428841444841482111118844111182888884848281811418818844421818888
811141142844881842888411812212441281818188812148811888442888121188818411844888
114182884221811142884488218141241842188414818814441218841182418811414488848841
884818418182888411412182112822188811848122814142441118841111811141821448142821
422421188148448848812882111211141411842888822221188482841448122884818811142428
188124414414441281818442821888141488142221122111281282228882141881814842441141
128841841188224221828448884818414481288441848112841282812182888142882814414418
412888881241188888444141148442111141188818841881818411142141121124211821188811
411181821181888118821484288414811411842118841814888111818844111822188841188418
811814484811881841821122182821142882218814118418448141141841148884818188118441
112818111121142841188818411112111128222114141841821148188842212821144888488441
111488821114884418841884488842881281218811112848481811488118882811812142118814
184218414184882141814442888814821144112482218884484841141844144421821888484888
442284842842811841818421121414822142128814812188424484222118421822882814824818
812888141118482844218888421114818488842811888448841821111188441844182211818412
828121818418142812142188441444811818441442182212881828182848888414142818811818
412184882888188211188842412821141841122141141418141811222118888418841844484848
411141881888411112828148148182111881881281822848441821488182848111448211818421
141111488288181228148811818444118218122124882111811881848284822821882828888442
242811188888488881844144111488848288448841841822841848248888441141828848884841
821144448484842888282821848448188888121112118148841111888841848812884411488484
821441121811111214112224424148118841114111884422111488228484422822844818411141
142411441888111888814118111411488828811112114884484441121481818422141111822848
828121111428118811148848484822888128842148828844148484884442882242811142142812
842888184411884418882421481818844488844422121142811112411842841881844421882112
114482824448828811112414411412824148481842212221114212121111888841411811128141
211418142111811881818848488441418144482842821128412242184444818111444414212888
828818122111121288112182814288111482228141141148118818121888822112814441141122
222818814848814182141211218141118848228148422141824141888142811484812818111121
844411118888188811441884882111188828821124414442818812441284418841814112144888
118818421148841111811412148488841848841412814118888411812118441821882412142212
811882814144218848888842811814844114848148181241881821411142844188484844482128
888484848841814818288222118818882218421218114844214241414888411211444818844848
418F88481221441441888841148221144142214828848441818422818441141148148812888844
122841884221148821181848844811848441422212118448842888818122111811182212818848
422814842118842882142118882814414141142284841888488114822824122814412881822142
188828114811148841488848821481842841848488888121281211421822141412822888118881
844148814111411844111122414811141888814248488421248141124442888811441148142141
888418888442844441122888122288141181848124448818482148441441142848118444118811
812121288441241141141822888481888844811188122288141212114282144884422481882812
182211181818414141281842848221111411112111141844484418882418212881811882141112
144888822141111184811118821841411118888141441821211888811818428421114141124844
441122142888811848888821141884288111441241111114111141441411148128882141144144
812814188488882418482811818141144482218142828224114488212888114888112811221818
811411811814418181811844848484848844118811822841182122141184412188888142141848
418814111421811811881888812212841288812111888844142844888111281881884844418411
188842841888418811418881881288114142844448841188141841411221118114484818141842
888418121141488418444882481221818242821811212818281814112888842144214822882244
242884818112848141118811814888848421288118481848448118884884411818148484841228
818481841111124811844148411811488111181811481822141488188841481828421441818141
888141418411848141141888842244111848412842884848881244141841844818888282148882
141241188842811148888811844148848448811888418828811141421844818244448812841842
114811182221111418821122112148122188841141184812288828811424411488848418821222
888184841121818481842842141418441484488482818841141184848811484418821811482814
818841182841841114824112114141111284888421114828424888482884444421844141124248
488812811184421411818128411842888488418444818824148124444118121212112884418441
48814281414141848182214188848484841118828428111288111181112118814140'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "ORF1"
                  },
                  location int {
                    from 374,
                    to 643,
                    strand plus,
                    id gi 0670650651117671
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 374,
                    to 643,
                    strand plus,
                    id gi 0670650651117671
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF1"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "polyprotein"
                  },
                  location int {
                    from 457,
                    to 9765,
                    strand plus,
                    id gi 0670650651117671
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "polyprotein"
                  },
                  location int {
                    from 457,
                    to 9765,
                    strand plus,
                    id gi 0670650651117671
                  },
                  xref {
                    {
                      data gene {
                        locus "polyprotein"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25457", version 1}, gi 067065065076254571
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Iflaviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 89,
            seq-data iupacaa "MNTITLFEEQRVEEVQLRPRFQIDLEQLWRDLQTQIRRRPILIPILFI
CGIILIPILALRPNRSNTPVEENTPPPSPCINEDKPECYLV"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 88,
                    id gi 067065065076254571
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25458", version 1}, gi 067065065076254581
          },
          descr {
            title "MAG: polyprotein [Iflaviridae]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 3102,
            seq-data iupacaa "MEGLTNSNTTATNSNPNTVYMRNYLNSHPRIATKQIEYTCRGKYTTSV
TLYQRGQTRVLFSVKQSGPNKKMCMEYCYTKVAEYLKLVNDDWKVQGLEENLKLADDNLTLTLDVERKFQELSEKQKE
TILEDYKLEYQNQYEDWSVERVITYGRLLRQMRKFDSPMLSALSQQIYFGGLEDAIKIMIGNLYEDIKGARGWHGQFG
PYESGYTIRDDVGVFLVDKIMNQPIGSILDIIKHVKDEKDNWNYEKKGNWACQGLDSDQPSEIIASLDESRGVTTTTE
NVTVVGAAESVEESILTSLPRDLLGLSSTEKVYDFTDDSAGIMSRFMPLETVNVAATDAGLIKSWRIIEDLVKINSIT
TLPIQGFMLGHYDLEFKLIAQGVPQQACLLMLGHCPNPYGLYDKFVSQQGWTVDGAGGATGTNYPVKPVYETYDTYLS
VEASVMRPNVQLSLESQGEVTLKVKQKYHKTMIRNFDYLKASGTNPGIRGGMQGLLTLHALTPVMVGTGTSNNFDVRI
LFRFVQAKLGAMTEPVKEKTTSARYNHLYVVPHDFKDWEVLKVSQDPEVEKKRQVIRAKYRVQGPAMSVLGGVKSGMM
TAVGVIDSIEGITGYNNKKIKNKDKPVDAVSQVTTIPRPRMNFTNGEGPDSAVIVGISWVELTHILQSFEDEPKSYKD
LLNIPSLMKTIELGDTALPGTQLWNWNLQPTDGNWPLSPGQFASYGYANNWMHTTVAIVSSGFTNYSGGMTLCGQFVK
TMFHKASIEIAIRFGRDLTSNAIENSYVTIINIQDTSAFEVHIPYIYDTPTRPVSGSSTAVALPNTTNPANYAFAHSS
AITIRVLNRLIVGSGASSTIRCLLWLKGAEDFSLNFPRSFNCNLMPEIKKLVYPPQVISVTQGITTPLQFAVVARPDT
NVPKFFQQYTPSVYLAPNYVQGPDSKRHTILTNTEHLNFKSILKMPVKIINYYSYEPWVKYKVNTVTDTEVEVSDRAY
VTIPIAPLNSTFVQYLTHELYGENKLGETLGSLTQSHAYVVNTMFGMFSGSLAMTVIVDEGDAPVYWAYLPHDYRLRK
LYGGLNQTTQKAVMTHSTQPVLTSKNWKSVFLGSTTETHMDLMSAGGLNGIIVPKVNPTEKIIIPMSAPLNWLLMNRS
IMNESKKFTTQTMRENSEWFNGHLAIWCNVKCKISVLLNMGDDFELGGFLGHPGFPNIHGWINVDDDRRANLTQFVTQ
GEETPYSDQQEETEKEGVSDAVKKEVEAILAEDDSVSEDIQTEYDKLMLEWENEQPVEKPLNPQVFVTQGESGFLLKD
LTLSGWKSLKSMIVSTAVTTAATLAFNEVDRGASAAFGAVALYTCMGGVQQLIRINRTAEMSSEVVQDSVQAVRETTE
ELAANAMSEIKNMIDQLFPFLRSTSEFMGSLWNIAQHLVHAALAQNWSNAAFAGFCVMMEMKLLEWKDWKKLCQPMEL
FFTRAQSFITQGPETWTSLAQVLTSLICAKVQVKADGGLQSYLAKIFSMHDYRAVGGLNSILSLVRTVMNAVSVITNW
AFQEADPNIALLTALQNQGEDLEDFAAQASEFLTFFADLEVTKRENRIKYLALILRAIKIREILVRVNDPKIAGPLLQ
TCVKVIEKANSVQYLLQCDIVKQEPFILWLEGESKIGKSFCVYKIIGHIFKEAGYALNTTDYIFTVNLALQFMNGLRS
CHKAWFIDDALSIRDIESIKRFVDCMISLKTSTPFNVPRAEIENKDQVAQPQLVVVTSNKENAFPQLSEVPCIKALLR
RRDYMAHLELAQPNYSLSDYSAEELDEFRHLVCMRYLDVTDSTSLASRRMTFYEFLGEVAKEFIDYMKAEQRNQFKKY
QYLIQCLSKNAIDSLNIGNPFELINRCNYDQPSQASIRMMVEDEVCILMETIKQAEFMKTKLPRDDQVFATQGLLEKF
QSWIDWFAYYIKTVYKLISNTAIRCMRCSDRAFSQGTSIWCEDGGHHLCLACAANDMQQSPALSTLRCPMHPSSRITL
EMSGILQSMFANLVDQKLDGSNMTLHMIATALEGNMEASTYLSVLRAINMTCSLFKFATQDEPEEIDNPILIDGCVKD
YLKTLVVSNYYYPVDQLSVKVNMQEKFLYLVNMGIIPRSNNYVCPHSLLAAKFLFYGGKFVLVDDPDVVLEDLVCDQG
VCAFSHVVFLQTIVENFDVTWKLCQEHKNRTRRVIERNWPKFLWPPGMKEAKDLNFRIKKFLKTSWWEQYMPENPVLQ
KLIKVVCPLLAVLGVCWASAKAATALWNWISQYIGFGPQAKTNADYGHSTRSRVLKTRKTRVYATQSTQNFENKLDKI
ANNYIVLEIGSAQLTAWGIKGSTFLIPKHLTSSLKSLEEVIIHFPTREEPPISVRSDNIEIVLVPDRDLAKCTIKHGK
ILFKDCSKFLQRRAITDWIDRTGLIMQVENKTVFDVETRILNTMDHSTATNSRGIVFANSGSVVYDYQKAGLCGSLLC
VDSIFPIISMHISGSESLNKGIGVXLYQEDFEVQGASLVDMPMEEVVTFGPDCQVQYVGNVEPTMVAFIPNKSTIVPS
AIASAISRREACDLLSPRPRTYPAFLSKVEFVQYADVFLHYKHPETPLIYGVRKNGKPSKDFSVLHVERAFKEVADLI
LAGEPLPLEYVRVMSVEEAVMGINTHLDEEDPLYFGKLPLDTSSGWPYSTSKYMRDYAVQKKTKDGWISITYNSETGF
PEKCKIHEKILEDHNFNMLQRERGEPAFNVFQDCLKDEKRKEEKVLSEGGTRLFSMSNIEGSIALRRFTLSLTNHIKN
NRIYNGVCVGINPESPEWTFLADVIRKHNNYFTTDFTNFGAGLNYYCGMKFADLIKIYYLRAGVELDENQIRCIDALI
QELMGSYHIAHNTIYRTFAGSPSGACITVEINSFVHLMYVVICWNIVCDLMYEKRNGVNKLKYKYPELFEYLQDIDLE
MNVEDFAGNVTACVYGDDGIFSVSDEFAKVFNGVVVNLILKEHGIGVTDASKSQKIQPTVPFEECTFLKRKFVIHPLC
EHMYAAEMEWLSIEECVKWIHKSSIESDESRTRENCLQSLRLSWGHGERVFTKWQNILNALLMGIRVRGIHTTWMELA
REMYPDLCVKFC"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "polyprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 3101,
                    id gi 067065065076254581
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254571,
              location int {
                from 374,
                to 643,
                strand plus,
                id gi 0670650651117671
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076254581,
              location int {
                from 457,
                to 9765,
                strand plus,
                id gi 0670650651117671
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析