Quaranjavirus isolate Culex/Museum41/2023/Quaranjavirus:segment:3 PA polymerase (PA) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Quaranjavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Museum41/2023/Quaranjavirus:segment:3"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: Female"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Museum"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111813", version 1}, gi 0670650651118131
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1434,
            topology linear,
            strand ss,
            seq-data ncbi4na '411418448181282414142122881144848484144888118428
412842412111844484412821844844114414244282242228411884114188222821414888221214
221184488212114148882828812284414888421142812188414412122124114144128441414124
184111888828421114482284222821184184484212184414414122881848418444418411441184
481414414882281148411488411188414422211444188844444822284881242414482111411428
844484421111441411144828212882112482288444114114414848F84148118844228428281421
41114228444418844F248114821124481144112412212148428412884184214414418882128441
428221244424241818821228844184828214884281218414284824114214218822112444181114
812882242412884428281188414214212824182112221184441428211421214211188144142882
812888114484888444282121244428428411812848142214282141112888812828242281441448
428812888414248842411114441112212448111484184812882221282812822488442822418224
118412412142181111144144888484828444182848488141444222212212421114412421124412
14418882888218112848841124142882218844F412184442428411844428444188484114118421
14428848824444211411844124228881818228224221411F828182842114214412221142888884
148888482212118821122818284128424112882488442414188484184112142182418482214124
122141142821844414128422211411288284881142114444224844284184414141488424411824
182184184421484284444144821214414414448422184428428484144114182812184128428288
421111844241441412418228844848141412844411441881428414824281118411848884214418
821221288421284812844421114214121144418881284288424284448828'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "PA"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1433,
                    strand plus,
                    id gi 0670650651118131,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "PA polymerase"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1433,
                    strand plus,
                    id gi 0670650651118131,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  },
                  xref {
                    {
                      data gene {
                        locus "PA"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25515", version 1}, gi 067065065076255151
          },
          descr {
            title "MAG: PA polymerase, partial [Quaranjavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-ends
            }
          },
          inst {
            repr raw,
            mol aa,
            length 478,
            seq-data iupacaa "EDGILESTLRCVRFNADCDKWVDSWWKERLRPELKIPSEFPQPMVHKS
FSYLEFASYIEDTTKRTGETMKFSAKVLPSMMVHMEETLCDGDEGMVEEFLSEVEIEAQGIWGSLLREVKEAWVAKGE
RSHFNVLGKKECXSNWPALAESLGIGRKSTVRNDHSADLMQEDFTGAPRARYSPWMSQLLHELSKQHSNGIKYFRDLA
LIEQHSINPMGAQAQQIRSFYFKVFGLTRAAEYCSQLRNFYSRLGGAYFERCEKGNHGKVMYFPLYSVGSDPNDDSIK
RRFVSGICVRGPHHAKDATDRISFITVERASIGDMGAEWAGIVKNARLVRGKNGRLYILRQXSICKQDPSFLSFVHNS
TYLTANFVGEIVMNSIDVQTTRSSWETAQELLLSKGPWLMERVAESIMMAVLGRSQEEGAMAAVRKIYMTALAKWRGD
DPWCRDWEGLAESLNECLQDSPLALYWAKQTRDLLLALGS"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "PA polymerase"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 477,
                    id gi 067065065076255151,
                    fuzz-from lim lt,
                    fuzz-to lim gt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076255151,
              location int {
                from 0,
                to 1433,
                strand plus,
                id gi 0670650651118131,
                fuzz-from lim lt,
                fuzz-to lim gt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}