Riboviria isolate Culex/Museum43/2023/Kwale_virus:segment:2 Capsid protein (capsid) and Movement protein (Movement) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Riboviria",
orgname {
mod {
{
subtype isolate,
subname "Culex/Museum43/2023/Kwale_virus:segment:2"
},
{
subtype nat-host,
subname "Culex; Host_sex: Female"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Museum"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111820", version 1}, gi 0670650651118201
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1553,
topology linear,
strand ss,
seq-data ncbi4na '881812882288448814222881818112841428811884288818
888112121184148111214884114111214288421828881128428211481428424184114488422111
22421122811242882842211411124424211814424211811411124144144142242F442224148441
48882842841844124818818F482211141428411282281882414188111482442114418114822822
124828818818411422884214224122824122241184124844284114128284148448148882828214
181188844218822424141281414818242222428484444424184111418442828281482482441482
412844412221184124122484228148114142114482211148848128228112888214482221481844
214114114414884128282221424828244881214148241114818818428282824418824444418181
228184181412111422228848414488884428812881424848822822118114411414414214812888
444412182844182212818114481122284214444228111814441412414124222222221221228228
441228148484888418812212184188144414481122281818411484241442182181141121114818
41421821121821421412282144481881F114222888414182414184424118144418184181124818
421421424422414482881482112441122418884122188414418118812142488828212418418824
111484418112484148411181211848488824144222224124844118888411228481441881481218
281448884828884111148221812888224114181124184888418888128482218882484824118144
118188888488228114428288111411481118488428188824411112428114182111181188448228
481184118288882118148211428228244142418118844882184181111888848214884181414182
881412228121424484181218482112188482182118214122818181418818144844418448418184
484884418188124224188188124888818118822484121828884884212882444414444414448414
14882242442411814814241F824288411148412414411822221822824148888821148442414888
211488484412212818814880'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 57,
to 719,
strand plus,
id gi 0670650651118201
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Capsid protein"
},
location int {
from 57,
to 719,
strand plus,
id gi 0670650651118201
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "Movement"
},
location int {
from 774,
to 1550,
strand plus,
id gi 0670650651118201
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "Movement protein"
},
location int {
from 774,
to 1550,
strand plus,
id gi 0670650651118201
},
xref {
{
data gene {
locus "Movement"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25524", version 1}, gi 067065065076255241
},
descr {
title "MAG: Capsid protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 220,
seq-data iupacaa "MSKQLKKQLASLTAQVAAMKVAKPQPNASAKKRRNRRNKKRGGAAGPS
GVSADGRIXVQRAELLFEIKVGKDKSSTSYYEALQPTSTRMTWLKTLSGSFSQIIWHSARLEYRPAVGAMKDGSLVVG
VDWDPMTTVPSKSKVQSCTPNFQVPVWQKKELTLPASRLQSRKYYALSDSGDIPMIDKAPCEVLAYLACSSNKEEEQY
FGDIWIHYKVTLQGPK"
},
annot {
{
data ftable {
{
data prot {
name {
"Capsid protein"
}
},
location int {
from 0,
to 219,
id gi 067065065076255241
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25525", version 1}, gi 067065065076255251
},
descr {
title "MAG: Movement protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 258,
seq-data iupacaa "MIREVTLYEVRGIIRTKYEHQHQQTSGYXKPFEIEMANRDMITYAAAA
EVLVNGTDLTIEDNYSVSHDDSKVDNVSEIQCVSRPPTWNFEPVGLVHLGLSLKSPYFPKITMFDFTVHFVSNRNIFV
PKALKEVNVAISENAKIKIIGPVMNLFNSQAPRSDNWFMIKFCQLIEILDPTAVIHVNIVINQTYIDYRWDGDMVLDI
TPIITFYNSVTSLLHFGEGEGESSAANSSXSLESDEESPSSSFSSGEFQVVDHY"
},
annot {
{
data ftable {
{
data prot {
name {
"Movement protein"
}
},
location int {
from 0,
to 257,
id gi 067065065076255251
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255241,
location int {
from 57,
to 719,
strand plus,
id gi 0670650651118201
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255251,
location int {
from 774,
to 1550,
strand plus,
id gi 0670650651118201
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}