Riboviria isolate Culex/Masinga5M1/2023/Kwale_virus:segment:2 Capsid protein (capsid) and Movement protein (Movement) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Riboviria",
orgname {
mod {
{
subtype isolate,
subname "Culex/Masinga5M1/2023/Kwale_virus:segment:2"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Masinga"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111829", version 1}, gi 0670650651118291
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1703,
topology linear,
strand ss,
seq-data ncbi4na '228821824214281288414214881114184211428488828821
128488812821884848881118181421188184282148818181144428112211481188148114841888
181288228844881422288181811284142881188428881888811212118414811121488411411121
428842182888112842821148142842418411448842211122421122811242882842211411124424
211814424211811411124144144142242844222414844148882842841844124818818248221114
142841128228188241418811148244211441811482282212482881881841142288421422412F82
412224118412484428411412828414844814888282821418118884421882242414128141481824
222242848444442418411141844282828148248244148241284441222118412412248422814811
414211448221114884812822811288821448222148184421411411441488412828222142482824
488121414824111481881842828282441882444441818122818418141211142222884841448888
442881288142484882282211811441141441421481288844F41218284418221281811448112228
421444422811181444141241412422222222122122822844122814848488841881221218418814
441448112228181841148424144218218114112111481841421821121821421412282144481881
F11422288841418241418442411814441818418112481842142142442241448288148211244112
2418884122188414418118812142488F2821241841882411148441811248414841118121184848
882414422222412484411888841122848144188148121828144888482888411114822181288822
411418112418488841888812848221888248482411814411818888848822811442828811141148
111848842818882441111242811418211118118844822848118411828888211814821142822824
414241811884488218418111188884821488418141418288141222812142448418121F48211218
848218211821412281818141881814484441844841818448488441818812422418818812488881
8118822484121828884884212882444414444414448414148822424F2411814814241482428841
114841241441F82222182282414888882114844241488821148848441221281881488842211248
482488114842824120'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 181,
to 843,
strand plus,
id gi 0670650651118291
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Capsid protein"
},
location int {
from 181,
to 843,
strand plus,
id gi 0670650651118291
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "Movement"
},
location int {
from 898,
to 1674,
strand plus,
id gi 0670650651118291
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "Movement protein"
},
location int {
from 898,
to 1674,
strand plus,
id gi 0670650651118291
},
xref {
{
data gene {
locus "Movement"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25536", version 1}, gi 067065065076255361
},
descr {
title "MAG: Capsid protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 220,
seq-data iupacaa "MSKQLKKQLASLTAQVAAMKVAKPQPNASAKKRRNRRNKKRGGAAGPS
GVSADGRIIVQRAELLFEIKVGKDKSSTSYYEALQPTSTRMTWLKTLSGSFSQIIWHSARLEYRPAVGAMKDGSLVVG
VDWDPMTTVPSKSKVQSCTPNFQVPVWQKKELTLPASRLQSRKYYALSDSGDIPMIDKAPCEVLAYLACSSNKEEEQY
FGDIWIHYKVTLQGPK"
},
annot {
{
data ftable {
{
data prot {
name {
"Capsid protein"
}
},
location int {
from 0,
to 219,
id gi 067065065076255361
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25537", version 1}, gi 067065065076255371
},
descr {
title "MAG: Movement protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 258,
seq-data iupacaa "MIREVTLYEVRGIIRTKYEHQHQQTSGYXKPFEIEMANRDMITYAAAA
EVLVNGTDLTIEDNYSVXHDDSKVDNVSEIQCVSRPPTWNFEPVGLVHLGLSLKSPYFPKITMFDFTVHFVSNRNIFV
PKALKEVNVAISENAKIKIIGPVMNLFNSQAPRSDNWFMIKFCQLIEILDPTAVIXVNIVINQTYIDYRWDGDMVLDI
TPIITFYNSVTSLLHFGEGEGESSAXNSSESLESDEXSPSSSFSSGEFQVVDHY"
},
annot {
{
data ftable {
{
data prot {
name {
"Movement protein"
}
},
location int {
from 0,
to 257,
id gi 067065065076255371
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255361,
location int {
from 181,
to 843,
strand plus,
id gi 0670650651118291
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255371,
location int {
from 898,
to 1674,
strand plus,
id gi 0670650651118291
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}