Riboviria isolate Culex/Masinga5M1/2023/Netjeret_virus:segment:RNA2 Capsid protein (capsid) gene, partial cds.

---

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Riboviria",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M1/2023/Netjeret_virus:segment:RNA2"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111830", version 1}, gi 0670650651118301
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 1451,
            topology linear,
            strand ss,
            seq-data ncbi4na '242441141144224882228821242242142412248222448222
244221222141211412184221124821821422224822214482821112442884144844414882224821
28144112418442221121441848484F4482824821428828241F2411441882282112182282411428
822844482114184122244288412122242188822144214881222812228182812482212848184118
21484828218242421418288224218282141842112F24221F211422121844228214241182211441
41441242888821228418244144421821448F422184222182414482218412844182214441282441
428844128412428441444818221812118182112488224411828882488224112214241141481284
214211481214881222441448412882444222481121424214118212112484818411824184182822
224882484281141141214182411424848288412112412221182412441421181214882482221281
221422112884421221422442282112222122414112282884442812411428212124821221844218
24F411424284124284812421112124112418421844222124424112441281424822242282848882
112224488288844424111842412828424182184148288448241114184881481484211441281222
224284122142441481141828488448124122182488124411418448418221124122284884141242
121412448244884121822124812221282418228422122881422211821424184812124812241141
24124118841441148822144112484281228212142142411821148822FFFFFFFFFF211441844214
422122182118148142812112184412421221882488821822818248412228412141422282412182
481242814244884824884422212442241882482122181442428411282812144248124182114412
814814822824818412288442212844221411824822124182424241818111248182811142214481
112218214112221214222448811422841848814181281814118414211122224121111128211140
'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "capsid"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1226,
                    strand plus,
                    id gi 0670650651118301,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Capsid protein"
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 1226,
                    strand plus,
                    id gi 0670650651118301,
                    fuzz-from lim lt
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25538", version 1}, gi 067065065076255381
          },
          descr {
            title "MAG: Capsid protein, partial [Riboviria]",
            molinfo {
              biomol peptide,
              tech concept-trans,
              completeness no-left
            }
          },
          inst {
            repr raw,
            mol aa,
            length 408,
            seq-data iupacaa "RGRRPFPSRRSDRPGPRPPRQDMPTSSAPSQVSNGLRWEFPSLGTMAQ
QDVXGLVSFSXEGFLNILEASWVKMTRLDTRISRQLPYPIYVHCMNQCLIAQIFRISDATRXQATWPQRIQGEDAFHL
IGGHQVAMPIEVHDWIQGLGAWTDAGGYPYNINVPESFVPNQRRVLQQVQLPGGDFGPVTAQNHNVYESMISPFVLRR
QIEACLDNDPIDGAIQFVPLPANLAPAGLNPTENLLGYEAHTSPWHREALTLYANTNDAWPTANGLASRLCFNPVLWA
KCDSAIMSLGRKMLVVQGLPPLTSGVRSVGTTIVTEDGDPTTLLRRTDGRLTSTYPLDPATLAQSAMYTYRRRRIEEV
PGTCYLTAANQVPXXXQGWQATINSSYNMDAPFVSSYRDPDRALDIVR"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Capsid protein"
                    }
                  },
                  partial TRUE,
                  location int {
                    from 0,
                    to 407,
                    id gi 067065065076255381,
                    fuzz-from lim lt
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              partial TRUE,
              product whole gi 067065065076255381,
              location int {
                from 0,
                to 1226,
                strand plus,
                id gi 0670650651118301,
                fuzz-from lim lt
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}