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Iflavirus isolate Culex/Masinga5M2/2023/iflavirus polyprotein (polyprotein) and hypothetical protein no blastphit (ORF2) genes, complete cds.

Accession:
C_AA111833.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Iflavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M2/2023/iflavirus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111833", version 1}, gi 0670650651118331
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 9363,
            topology linear,
            strand ss,
            seq-data ncbi2na '48C3205C5DE331AB00BECCF00FDCF33F0FF0DF2F44A9CC17
157CF2C100C40376B1216AB1E3F8FCFC0320FFBF2FC68235B277CF4154708BC55CF720F73FEADC
D0C2CECC0C30FF0B42B1B3FCC8CEF2C2C408AC661DCBE0630324DD89F14B257A6F0432009CDADD
FF809059C7300C9B384AFDA5F0C46F25CEE7005D8E33B375321F6A4CCDFF02B39BB1F7836D3CE2
6F31860A1CD874FDD7FFDF40FCEB8433023F030260F3128E037CCB80CB02DAB5FB0540549E2EB4
20258296C0889C4B23382F2F8EB33F8D8F26BF383B6D88F3CD89FA421FC5018DAC8B488970F20B
3249DBF8FD8222FF6F5607CFA62FD8CC23A0297480413FA728D5DA0B301649262C4988233E39FC
308433036B17FDEA1F0025C0150D3CFC097FD1B0C822722EFBFD377DFEC038E2DC234B88DFA5E0
5D23A08F732DB054AA0E76248342C0D071DB3E08D77EF027810DC41C0898AFDCC1FE5D37B20916
1BF2DBFC48C0E8FCFE8873D4E821C74676F64A03FA40BBFE7E200E3C08C13C09D09FF91F38E493
09DCCAE43F08BD8F777872C36FF486AB9FAF9F7D1ECC78C2DE68FF433CC42EEF499FC49B4C3B88
7FF9EA9E3F039207EF356CC8CEF8F4D0EDDF423024A3DE59737F90BDC955F26185DC31A7112E43
324BD3B257208EF4AD0E83B99D8CE08F68EF81640E8443E0D8D9C37EFF215F7BC3067BC39A61F7
B1C107F2A9A16036E38D75CC55F497387FCC5D2AC3A34324FC40C39EF897327BFC22586496B406
518EFF8CB8E23B670E2EE3821BADFCF074020BE17748716B4BFF10FA09EC5FE500394D3E523CCB
30FD2A7BCB271D7125F26FE9D36FF31B3E9BAC13E27C2762FEF38BDFF4C2A4230EBB7D4D57CDC7
D52B63300BA408ED2F0D2BFD8CC4355E880233F3FB5FA43A283DFDEDABC8DAF2F38EF82C5371EF
C7D44C3C35CF326323A6C51480F18E0EFC4F225A210FF8AE9CF519506F3FD8BFB312C4E739758B
110DD7117CC3FA0267EB3704CC3D49EC0242DA80315BCB14C4F403B2C0EBFEFAF31037D08E8F1E
CC2B20204282AD8CFD22F004D23A903DF4B1AC5CE3524FB41F722746A7CF3B684898B7CC9F33C1
8A70048EF88099B8FEB2A07FEAC1A3A15E8B8AE2418C3303E8D4241E31A08D756EE8F8920CC0CB
7E18FDFBF3E05D23A31D6D25BC0FAC0349573B70FFADF64FFE9820ED78F30B49F54C8CE0F7EACE
78086C9D8E80A8E5D205D5F3D2A88F62E4D633B724D17837D27BBA9C12833A2A273341889089FF
66AE88A2B3D8CC8FEFBCFA0351582AD8E3B3334F5D4E329CDF4D349D537402B02242F2376BF8CE
F031D0CE7DD33929BE66F0D233FDEE8AF531C4388283FFB47330F9DE3203CCB8C3AB77DFFFAB0C
1170209233537D0B7FCF7F278E3ECAFF383F3689D42BBC6373710E91581740EDA156282F696A3E
FE7227FC3CEC22112CDA752F1CEDA09EF11A9270C946F82FB6A84F6A317E942BC017C9A58BDDE3
0ACFA31FF0E73353558C30A030087ADA47FFAEBF34D2C9FF80FB3747DFB39CF32AAC7024BECEFF
9CFFC3FBE22CBECAFCDA5D273850AF12BFECD4833ADF6FC82355A041CD52A105E05903A08418CD
B29FEB11F3FF13737718EEE8BC09C4556D033B703C9D1A1CFF973604B9484280C3BA84FFF808C3
3EDFCF018BFF1F4FCE8DFF74116D438D38DC365A0C0E3119F9987A38C8ADD7D7CCDD49C3827FAF
1040D74FA3D002FFE23A73AFA9890E9FC9C71FFAE21F70D063C9251EF434C5F6227C20BC8A0DFE
B43202BF3D8BBD8CE05BDE5EEBC92A0A7AC4A00147B640CF9A58C0FE6827EC3CD3AC79B6CD158E
D27AD22333A3A1E16341716FF6E86393EE4E8DF3838C73FDB767CE7C3A00D9692CF9B717CF76ED
8E30A303CEC1FD00CE33DDF607F1F3FC306FDE8B938F7824FC36986E379E7B3F63CE5FC2024863
A08DBC0A04B31B18A1BC234E3C28D60906E300C3533A24FE8CDC42EE35CEBE30D81003E262C528
834CE58C4BCE0AC3CE1654C48B14CFF20DA40336826B33881C381BFA5805829F2B737FE38D07C2
8332C03FF8348D0CC038E15789C400EB7002ED0326EEB6038E3F3E9E05D23288E03C3502325BC3
CEF197F688FC02B5F413EEDD4D30EE617A23EFBCE3983080EBFF373A4223689AD0A655F1AEFEC0
3D9417869FAC122FAB0F9FBF920920258664FFC03EFFECE8AF14F48E2B4A6FF623D28F17CD341C
5EB705F040A23BB85C3D640FDA0BC0F07550B3639F8771D291231AD07C620AEA6363CF433E4129
BE6EDF1292FCFFD13C3D0BFF03CF3A40DFE298CABF367928BCFAFCB2D1B360EFFFA288C28EC822
590313576A23CF717C034A800063DB49810C0DFEC2AE73D40CC2FE2E3B20A92437D3E86ABDD040
365D031AC3CC36A8338A30EBB0260F9189DAEFC9DCFE76087DEBBE6D3C7D831F5ACC2A2C002B87
BAFD1B0288F99EF8338FC8A2F10FE6E89861EEBCEA1FB8DD5D0D335EC0FF08230741F33BDA30BD
D582F35F60CE38FB224C1F4B0FE4C73E3BF39C0B8EA23D0200C552494ACE2F7E85313A2BFE2C67
EA8A00AC2EE8D7CF8CB96D1CDB550FBEB313D24A0C0223D8AFD9E0BBEFC8887FE281702372F8BD
B225527230588C3BFFA3C8EAFF3DD08299FE8D78CE9D74F72C48049CC6D4D6030BAACFD73C71E0
5245FCDEB0215D97E24A7AE3BFE08FAEED0263B8163028BD8D43E1B123E50C78F382020F77FD2C
01739B1D73E057C12C9D09CC82A7573C0ACE9A050C40EDC4D20A3F5FA6C33185170F9DC30B7E8E
F48F341F12E3A0A382BE0A8CEC089C0A23DD85101203C620CE86ED539DF3FC41FB7C08E76CCF08
882B40B14AC01C8BFF80ED963E07C732741A433FF38F33F5D3F301DD8FE24C732B3C35A3AF383A
DF4F2688B7FCA3FD174CFF049E3C76DF1A1663CD8C0DFF803A7FF4125D42EBB800CE28BBDE28A0
22619B7FEB988B97C0060B354E8F113246237EFFC8535D6B7D7D280FB805BC30011E2EC1D1BCCD
20C973F2B3FE020026513C648CEC7AFC300EBFC3B3D03AE38FE3CE9AF01748C322EBF0C3B4774C
8BFF746B30DF08E1E19BC00BA10BD8533E77F2C82413370062BF5E5D35BF2A0A12EBC9D5F200A4
D0C1A31670FA3FA0375233989A6DFCB81DE038BEC8F24C774EA542FF30E0BFB8823C0225E98802
8EE0FF831534EA0DBE8C346FEA3AA782B5C2CF9FF0767EB53B10188F3AF9F1B0CAEF707E7FFAFF
CE9FC9A43CF3FBB0264A65349B7F38226F3A7DAE33203925DFF0CE2DFC1FAFFB7DFFB708FB7F37
F52DFC8FC2FF6EEE3F636FB80C0D144BF7A36BB58D83CBD02A70CCC55E0CB04030300CFD83F870
6FAEC2F9B3B3B983B3A06EC1C33EEE3C'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "polyprotein"
                  },
                  location int {
                    from 657,
                    to 8915,
                    strand plus,
                    id gi 0670650651118331
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "polyprotein"
                  },
                  location int {
                    from 657,
                    to 8915,
                    strand plus,
                    id gi 0670650651118331
                  },
                  xref {
                    {
                      data gene {
                        locus "polyprotein"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "ORF2"
                  },
                  location int {
                    from 8884,
                    to 9096,
                    strand plus,
                    id gi 0670650651118331
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 8884,
                    to 9096,
                    strand plus,
                    id gi 0670650651118331
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF2"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25541", version 1}, gi 067065065076255411
          },
          descr {
            title "MAG: polyprotein [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 2752,
            seq-data iupacaa "MKSYSEIVKSGPCNPNPAEWSRKPKAVKRATVDMKLVDGIFDRLAVYE
CRRDYYRAWQDFTKRSVESESLIRSIAARLISKRVFVPELIGEFRYKMERPQKQHLARIPRKYKPQQRVQREDIDALI
RQYKSVPFLGLKKPKTQSLFKAFSRNRRARVLFSSLLCKMMSLRSVRSWPEPQMEDSIVVTQGNARAESSKSTTRIED
PLVKAEQSTTKERGFYNFASSVEAPTFSRFTDKWIYLETIPWKTTHARSQEIWQSVLLEKMIKDNIKAQAFALMMQHK
LYRCNLRVRFSLTSNRFQTGCLVASSLYTDKSADFQYYTSVFSALQRHNVRLFAGADLNAELVIPYRYVDSSMSLQDK
AGFCRLSLQVLAPLATTSNTATQCNIAVHVALEDVQVNGMCARYEDSDVEPQMDTIESIANLVLDPSVNNAVNAATSV
LTTLGADRNRDDPPIPLQPMTFIPQGNGSIAFTNNAVEPIAVLRADAAGQTPRCFDSDEMSLMSVMKTWSLLTQKKLT
SQTTGQFLQLEAVPLPKMPSLPDYSIISGLLVATPTALAFGSSFYTYWRGNIELKLEFVMSSFHKGKIMVSSIPLSTS
QVDIKVAKMSVNQVFDIQSPGEKIFICPWQWRNSFCRVRSVSYDVEVPSTVYFHIINPIIAIDGVPPEITMNVYIRAG
DNFEVAIPRPTLFSSLYTVHAMPPSTQSPTPYNLESAWYLTYNSSCKSKSGKYPLVPYIQNVVNGFVGYTNLQDGLLY
KVERTRKGRYFRVKTSDGQILQYGTYDPALSTSRAHGLIMSDRASLIAYINEAKTDVEKARDLVGNFWVTDGPWSEVS
NDNINWIQATDTEDPPVWIEQNINSLDDFLFIEPQMDTPSAVKLVKSAPMSNFGLRIFGEECPDYKSASHRYEFLGML
KDVARWKGMPQNLPYSGEIRVHPICLASPESSAVWANRNMEGAISTRARAFRGWRGGIRYRFVVIGNPPEGSMMYISF
LHDRLSSSSAPISKGKEQVRSRFDMLNTQYASHMQALRVNQIFSVEVPYYNEKEFLSLYNCSDRNYSDNGSLLFWVIT
PKEADIHLQVFYSLADDCRFYEFIGAPRCYDLSTMAPEPQMSDPEEVRPGLFARAFNYVRDTVSAPVTMSEAVTRAAN
SHVEVVGDIRDTLAKVKTLAAEFSDKVLDTFNAISIPDNKEIKDWSALFGGLSSVAFEIVSHFLYAIIGGTKAVVCFA
IFNLLRVVVGLSASAMTKVTGFVSRIWSSFRRSPEQLSQGQPEPQMEDNDIVGFGTLIFTSISTMCGVKATPPSNMSK
LAHGLFCLSNSARQGNNVGHFLKDNIVFIKRVFTSFMDLFSTPSNDHDLIAGINDTRLRDWMIEVSFLISPANEALVT
TNPHWIQKVFEMAMVGRAMALATTFGETSNQRLAATVQSYLRELKKLEESLVNRKVYSSVRYEPFCLWLAGKAGTGKT
TVANIAADKFAEACNYHGTASYHPMSAGQRYMDGLTDQPTVFVDDALCMDLMNDTIFVSLMLNGKSPAVLRLPYSRVD
DKDKLCNFQNMIFSSNFTYFNNVSGVHDSEAFNRRRDLLLYFDYAFKKADDGRSLKEQYTYEDVKIMIKDPKQRDKII
HMEHLDIYKCDPMVDNRTKIERVPGESYADTVMKVIMTAHTEYHILESAKYRKRYMRTNERLAETEGLGLSFDDQLKE
YSKIFESDQYKMMTPELQKWSKKCQIACGRNDDLLAEPQIGDEINPKIAVNYVTPFGDLKGPSTLCLHHNVRPGDCCY
DANKKWFLSMARDRSGQGAPYGVCKIRQPDGLVTELGNCLFAEAESRRAFLKLFLYGGYHSDEVRRFRDSGLPYHQLP
GLTLTKEMCDLIPQISEVKLTPQVSMLDSTQAQIRSTYEKVGDRLFNIATGVACLTGSLFFTLIQVFKLLWQIFEAIG
FIAAGVIGLVVTYRMFFGGDKDVEEPQIHPSGDYSTLKSGKKTIRQRTINLCKGAIPNISLSDVEGQQSSLDGVLNKI
ASNTVIIIGEYEDNGVKRIARARCLALFARRLLVLRHYFEYFRYKGVKKVTVVSRKGDCAVEYDLEELQFAWSDDCGY
GTCDLPQSYPVNFKKITQLICSDKFSRSYPSNMMIVEHNFSNLHTIDVYAKVMGDSKKIPQQPGMSSWTIHGGFEYAW
GGKGKCGSLLIVPSLSSPIVGIHSAGIKEIRGFAEVLFRETFEEPKDLVEFVEPQLDNRDNVFGLDGFYSQEGALDPD
MAPHSSTETAIRPSEISGVFPITTEPAPLSGKDPRLEQAGDVLKIGVSKRCEPIKEFDPIDVQIANTDYEERILFSVK
PMRTPIEPLTVAQAIEGLPIKGMAEPIQMSTSEGFPWRNIRPPNCSNKSWMFRLSTYSDGRMKVEGICKELKEILDHK
QKLREYGRVPCSYFTTCLKDARILREKVKVPGKTRVFEMSPIELTIAQRQYFYDYISSFINSRFEHTIGINPDGYEWS
SLAESLLGFSPHILTADYSSYGPRLSINLLKMAFSTASKWCEKYEECSEEERATRLLVRECLKNEVSHGLHIARDLVF
RPSSGLPSGNCETVNKNTECNSRYIRIAYLGILKEKAPHYADMYWFNKMVLMYSNGDDLIMAVKPQIIEWFNNVTLIE
FFSRYNLKMTDALKSGQVRPYCSLVEATYLKRGFLPHPFREGQWLAPLEKASITDTANWIWKSPDMRAASLVNSEMSC
RLAYSHGPKFYNEVCEKIKRAWREKDVNFEYPSWESLDNHVWDGAEGPKYCF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "polyprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 2751,
                    id gi 067065065076255411
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25542", version 1}, gi 067065065076255421
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 70,
            seq-data iupacaa "MGLKVLSIAFNSLGPCTNEIMVAYVIGVLTCFLVFMALAAIIICVKRR
RHQRLYEERYGFGDIEMQPLLI"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 69,
                    id gi 067065065076255421
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255411,
              location int {
                from 657,
                to 8915,
                strand plus,
                id gi 0670650651118331
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255421,
              location int {
                from 8884,
                to 9096,
                strand plus,
                id gi 0670650651118331
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析