Riboviria isolate Culex/Masinga5M2/2023/Kwale_virus:segment:2 Capsid protein (capsid) and Movement protein (Movement) genes, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Riboviria",
orgname {
mod {
{
subtype isolate,
subname "Culex/Masinga5M2/2023/Kwale_virus:segment:2"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Masinga"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111842", version 1}, gi 0670650651118421
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 1699,
topology linear,
strand ss,
seq-data ncbi4na '424428844211228821824214281288414214881114184211
428488828821128488812821884848811118111421188114282148818181144428112211FFFFF4
188818128822884488142228818181128414288118842888188881121211841481112148841141
112142884218288811284282114814284241841144884221112242112281124288284221141112
442421181442421181141112414414414224284422241484414888284284184412481881824822
111414284112822818824141881114824421144181148228221248288188184114228842142241
2F8241222411841248442841141282841484481488828282141811888442188224241412814148
182422224284844444241841114184428282814824824414824128444122211841241224842281
481141421144822111488481282281128882144822214818442141141144148841282822214248
282448812141482411148188184282828244188244444181812281841814121114222288484144
8888442881288142484882282211811441141441421481288844F4121828441822128181144811
222842144442281118144414124141242222222212212282284412281484848884188122121841
881444144811222818184114842414421821811411211148184142182112182142141228214448
1881F1142228884141824141844241181444181841811248184214214244224144828814821124
41122418884122188414418118812142488F282124184188241114844181124841484111812118
484888241442222241248441188884112284814418814812182814488848288841111482218128
882241141811241848884188881284822188824848241181441181888884882281144282881114
114811184884281888244111124281141821111811884482284811841182888821181482114282
2824414241811884488218418111188884821488418141418288141222812142448418121F4821
121884821821182141228181814188181448444184484181844848844181881242241881881248
88818118822484121828884884212882444414444414448414148822424F241181481424148242
8841114841241441F8222218228241488888211484424148882114884844122128188148884221
12484824881140'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 185,
to 847,
strand plus,
id gi 0670650651118421
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Capsid protein"
},
location int {
from 185,
to 847,
strand plus,
id gi 0670650651118421
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
},
{
id local id 5,
data gene {
locus "Movement"
},
location int {
from 902,
to 1678,
strand plus,
id gi 0670650651118421
},
xref {
{
id local id 4
}
}
},
{
id local id 6,
data rna {
type mRNA,
ext name "Movement protein"
},
location int {
from 902,
to 1678,
strand plus,
id gi 0670650651118421
},
xref {
{
data gene {
locus "Movement"
}
},
{
id local id 4
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25552", version 1}, gi 067065065076255521
},
descr {
title "MAG: Capsid protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 220,
seq-data iupacaa "MSKQLKKQLASLTAQVAAMKVAKPQPNASAKKRRNRRNKKRGGAAGPS
GVSADGRIIVQRAELLFEIKVGKDKSSTSYYEALQPTSTRMTWLKTLSGSFSQIIWHSARLEYRPAVGAMKDGSLVVG
VDWDPMTTVPSKSKVQSCTPNFQVPVWQKKELTLPASRLQSRKYYALSDSGDIPMIDKAPCEVLAYLACSSNKEEEQY
FGDIWIHYKVTLQGPK"
},
annot {
{
data ftable {
{
data prot {
name {
"Capsid protein"
}
},
location int {
from 0,
to 219,
id gi 067065065076255521
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25553", version 1}, gi 067065065076255531
},
descr {
title "MAG: Movement protein [Riboviria]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 258,
seq-data iupacaa "MIREVTLYEVRGIIRTKYEHQHQQTSGYXKPFEIEMANRDMITYAAAA
EVLVNGTDLTIEDNYSVXHDDSKVDNVSEIQCVSRPPTWNFEPVGLVHLGLSLKSPYFPKITMFDFTVHFVSNRNIFV
PKALKEVNVAISENAKIKIIGPVMNLFNSQAPRSDNWFMIKFCQLIEILDPTAVIXVNIVINQTYIDYRWDGDMVLDI
TPIITFYNSVTSLLHFGEGEGESSAXNSSESLESDEXSPSSSFSSGEFQVVDHY"
},
annot {
{
data ftable {
{
data prot {
name {
"Movement protein"
}
},
location int {
from 0,
to 257,
id gi 067065065076255531
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255521,
location int {
from 185,
to 847,
strand plus,
id gi 0670650651118421
},
xref {
{
id local id 2
},
{
id local id 3
}
}
},
{
id local id 4,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255531,
location int {
from 902,
to 1678,
strand plus,
id gi 0670650651118421
},
xref {
{
id local id 5
},
{
id local id 6
}
}
}
}
}
}
}
}
}