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Iflavirus isolate Culex/Masinga5M3/2023/iflavirus polyprotein (polyprotein) and hypothetical protein no blastphit (ORF2) genes, complete cds.

Accession:
C_AA111845.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Iflavirus",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M3/2023/iflavirus"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111845", version 1}, gi 0670650651118451
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 9398,
            topology linear,
            strand ss,
            seq-data ncbi4na '448284888141888812418842824811118288488118214181
181411228122828418181244481111488481818811118882818818188811888811828814882121
444281811228122228818814811211118121111828244812141224444812841888418881888111
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188884448281821181148184818111811811888811482114481248188881814181848814811481
211141448124241282814884112418111814218282414288122148142228442488112118141111
428182448282888841114211224281281811118142481841214488824422881181212488142281
848428111122824184181848182822181412882444218181828888111448184248481288284118
248218818414248818124124114412818241282188828228888882882111888184484121181811
141888111811142411881812144184111828818148411181481114824448228848112221112221
428414844821141114224114422481114141428121481418184114881488418448181888418241
881424488818411848248241418818818241428844211412888122111241824481414821414142
281188141148181421428248884188824114141488882488222411288188442414888241818114
184411144228214111211218884428144182228244114818111224214214241481214241411418
188418428881181141211818111824481228888284441288111114228111122211821881888111
422888821248118141141428141484884888821828288288848111184184148281141821484141
828844228411228214184411418828181482481122214444118428241421411821148111821128
12824818841F418228288488111428411211828121128111414241448882818112888422821828
481411421224124888148248888121418111844188818884414128188221844114128128212428
248824214411188844211148488884288414111184188111418112188111428211428888421288
184184214218114282818144842118881141488241882828284128148118248888214124444842
884488428828821284818128418114828424418888211818818121148484882142428881214248
218118484141288888428444428418881118421411288488182224818141818488418821821184
828288211418111421441882842242281828884211488281422222881424124122828118124428
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418488411224211184412121188411824182428118288488881412228828488118112428488118
424424128828481281121128881444424412241118248418418228228181222288214228184128
888181228214448118441821181421888121118118428488414228181428488881141422412421
422448211124221241848888418148418414184824281184148484184114124844828881881128
211114114884122828214128122448214888881211884411428481228884221111184221821884
221418818148181188821444284881481428128228121422881424888442821824888818124818
844248448112188414288114282414888488184148828888218114442114181184484828822182
222881828128822214482418181111484421114184821488118214488882418181211822228441
411114181888188848228844211844144118828882848244488141824488148818418488411481
221828128488812882212181188118228188181424181418442481221221411188124184118488
812188141422441412118888414484428188221242221124881888824148884818121481218428
184228224148121211828228121228818118884411142428844818281121818118822142848111
142114824441111812224881481221812188211118481481118448888488448818121118288211
418441881284818114481411141121144114448241818882141488111121821418444211188288
214812448122818418221421884821128828141428212444288188184824412141424148288181
428818188112414428111121418488414111424248418884481444112888844481124418441222
844148414484142112418118181118844182211421128418124411418228222484844188414214
118181118148288412418882884888188411228214184418128224821422488111884481111821
422228184828118888448288242188888442411411848228418818114821428822218141818411
882884448184284111412481428241844111444184228214112282228818821444414188241484
218224181848281421821228411828821428484844428112144118184414441428181821124141
421141428888242444844141441448188241818141888488488188441118221222411444824184
184818181821882282218418144281828821821821428222182821111448111414211488141828
244888418184881118128211818428828218184214424884242488118214181888828484414488
221812812118414114411888884821281818118842828418141118818148418118444828288288
888844481181121228111411421418182218288211482888818828881428418418848144888818
411888182441428221144848812418281828121184421222411228211184824412222414411488
244224441884888428141428888118818481141412121481824428221488128184824411428488
121244421428118142212488411488482444412188244418122884422114488111122881424422
414882828418114481884418128888118428181822182222418118114411181111412844824421
288888448448881821821481428888411188481828212882884818428188181444448128111421
488481848888428188888118884884141481488481448881824422821428184122114488121448
888481822141181844828824888141141822224411211281822214441211228411224211184411
412112418182481442888448121288188888121828182828124184848441488111428121222224
821118184828111881428212441281888842281824112148422141211441118118484441218888
884111418118188482888188111241488888128821888184418288882821121224822118418218
418281182422441181118418121242884242412844184181414482822882288181828221428118
411428884488121121118228218844188211111488888414184428184488444241421184428881
428128128888448414128828118211241881421422128488211821812288241414288114114881
414411828884482118141114488818824148488241818411224882842284844881421444114428
448121441111122128482421118188424422418111888424411428848118818218448128424824
818212224184821428448214141818184418441284122418211228122488882484412418421884
842184418288184118418128188882482824288184288118441111824224421481884248281228
818828248482418418114418111881848112888211118184181882828824112888128818888118
112488828441484218418828411421888118244241248418284284284818882418818422888114
111421412418441141824881114411214818124812414412488114182184188114418224114211
248418111181182218184414218884418182812114848418228184488418118241121111188414
241481221441411821818422418121488184114481188184122422218121414812218188881411
824421111818244114244818184141128118411248884422411122411442881448281828888418
418211288114411818148111188888411821418211818111184184122228414281211111844828
111114848211181424848448241118418418881884428411228214181441418411188118221114
181422488118818488124228882441418881111448228821121884848282218218118484241228
441418848848818418424118114111844888881828184421141418244142448211442422228812
448488848111188242211228412442884481121414884448118842884888421411421411142241
242421888881111884888884818441448812218821418414482144248888241418821441881228
818218211281228448281122881121114414184848412281188224211188824411488111881128
222211481824184288412828128214421214181244821128812414114484442418241881882118
188421121442488424848288121442148881888882121881188211488888111881881844211182
888414424181444888182428421441488188448881481482124818241184888888441441418114
418481411414224211181218222824441418818828122881111821444111111124188248214241
121181118288848114448428188221118181148884148418481411444214211828821884412444
48828211211118242282111812448118818118F44441F818414418118448481114241188421241
428244848881428281888428241141288284484884248218812882411812882244818114441481
1F1114484128484488821248111441418842428488411818418881414414881211888424844142
412412848448818444128848418282228211821818228481118888114114181128211288181848
824418114882822241148818228824118184184188481414218112882148118884218128188418
488818428111484184441418821114111181222214214221448184148828844122181218441448
888414812428844441441111448114848441822881884181484224821281824822221188488448
181218821421441181111414188241448882428411484884888141414128888414411228111418
281488414882481414222214281418112241418118488888441881418444888818828211411442
428884418228418184428228218828148121411121428181248221822411181148444481888228
188128128411221421228881828448111412228242288414214428448418488884114188448484
821114241848411224181114414882418221188412481214188422118128418818411411141188
282888821481111228184248128228188411222881121481428211428181411444282228188111
448184424411221181211184828121821411441888228844248118181241221228118842828118
114828844184882141881821128812148418441144184114488411444181848111414281114414
188282412212111214111881241411818441248482221842828818888121128848288111418428
248181881141414114482111481221448111128141488888411184824224188411288128181428
211244211818888818418818188822821888181112828241888414218128181448188118224418
448818411844828821881424414148288881441888821228218188881121428418812824828812
441224241881824181118288884111184428888821121422822114844848411111818414414848
828414414411141424124248288884484241414842288111112411481822218441881212181421
241418288488888141221822822448288228821441118848411122488118111112128414848112
821248818182141181422818881448188884111411111424221218812421418184812844888118
111184488881184818821118448418418884188184424488111228214181181414844888118118
482128282181414888882821244818118288114184128412424881111148441211488241221818
842828881481411421121818281111241448882284228218224888144411441214844881428222
881411114421821181124418122428118844188844111828221418184241424424828881484112
828411184148848141881421812828218444222114888818118411488848414114188111141422
844241411114418484118888411812221821844411824884418118212488844418444428411448
228114818842888811282428844822184812111241418818448842881248118144848828112884
288888448888818442888142442118818818884848111424214424221821424828881841141424
881844288244841818141118421422828888118184148288811288448888482882888848281141
884828881828882214828881418881148888248484841888241824884841118111821221214888
284418244848224182411881488211144428118181812222841181481121111811181111818882
41188841281124884484811488424818481848424118481844112484811281181884'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "polyprotein"
                  },
                  location int {
                    from 699,
                    to 8957,
                    strand plus,
                    id gi 0670650651118451
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "polyprotein"
                  },
                  location int {
                    from 699,
                    to 8957,
                    strand plus,
                    id gi 0670650651118451
                  },
                  xref {
                    {
                      data gene {
                        locus "polyprotein"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 5,
                  data gene {
                    locus "ORF2"
                  },
                  location int {
                    from 8926,
                    to 9138,
                    strand plus,
                    id gi 0670650651118451
                  },
                  xref {
                    {
                      id local id 4
                    }
                  }
                },
                {
                  id local id 6,
                  data rna {
                    type mRNA,
                    ext name "hypothetical protein no blastphit"
                  },
                  location int {
                    from 8926,
                    to 9138,
                    strand plus,
                    id gi 0670650651118451
                  },
                  xref {
                    {
                      data gene {
                        locus "ORF2"
                      }
                    },
                    {
                      id local id 4
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25556", version 1}, gi 067065065076255561
          },
          descr {
            title "MAG: polyprotein [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 2752,
            seq-data iupacaa "MKSYSEIVKSGPCNPNPAEWSRKPKAVKRATVDMKLVDGIFDRLAVYE
CRRDYYRAWQDFTKRSVESESLIRSIAARLISKRVFVPELIGEFRYKMERPQKQHLARIPRKYKPQQRVQREDIDALI
RQYKSVPFLGLKKPKTQSLFKAFSRNRRARVLFSSLLCKMMSLRSVRSWPEPQMEDSIVVTQGNARAESSKSTTRIXD
PLVKAEQSTTKERGFYNFASSVEAPTFSRFTDKWIYLETIPWKTTHARSQEIWQSVLLEKMIKDNIKAQAFALMMQHK
LYRCNLRVRFSLTSNRFQTGCLVASSLYTDKSADFQYYTSVFSALQRHNVRLFAGADLNAELVIPYRYVDSSMSLQDK
AGFCRLSLQVLAPLATTSNTATQCNIAVHVALEDVQVNGMCARYEDSDVEPQMDTIESIANLVLDPSVNNAVNAATSV
LTTLGADRNRDDPPIPLQPMTFIPQGNGSIAFTNNAVEPIAVLRADAAGQTPRCFDSDEMSLMSVMKTWSLLTQKKLT
SQTTGQFLQLEAVPLPKMPSLPDYSIISGLLVATPTALAFGSSFYTYWRGNIELKLEFVMSSFHKGKIMVSSIPLSTS
QVDIKVAKMSVNQVFDIQSPGEKIFICPWQWRNSFCRVRSVSYDVEVPSTVYFHIINPIIAIDGVPPEITMNVYIRAG
DNFEVAIPRPTLFSSLYTVHAMPPSTQSPTPYNLESAWYLTYNSSCKSKSGKYPLVPYIQNVVNGFVGYTNLQDGLLY
KVERTRKGRYFRVKTSDGQILQYGTYDPALSTSRAHGLIMSDRASLIAYINEAKTDVEKARDLVGNFWVTDGPWSEVS
NDNINWIQATDTEDPPVWIEQNINSLDDFLFIEPQMDTPSAVKLVKSAPMSNFGLRIFGEECPDYKSASHRYEFLGML
KDVARWKGMPQNLPYSGEIRVHPICLASPESSAVWANRNMEGAISTRARAFRGWRGGIRYRFVVIGNPPEGSMMYISF
LHDRLSSSSAPISKGKEQVRSRFDMLNTQYASHMQALRVNQIFSVEVPYYNEKEFLSLYNCSDRNYSDNGSLLFWVIT
PKEADIHLQVFYSLADDCRFYEFIGAPRCYDLSTMAPEPQMSDPEEVRPGLFARAFNYVRDTVSAPVTMSEAVTRAAN
SHVEVVGDIRDTLAKVKTLAAEFSDKVLDTFNAISIPDNKEIKDWSALFGGLSSVAFEIVSHFLYAIIGGTKAVVCFA
IFNLLRVVVGLSASAMTKVTGFVSRIWSSFRRSPEQLSQGQPEPQMEDNDIVGFGTLIFTSISTMCGVKATPPSNMSK
LAHGLFCLSNSARQGNNVGHFLKDNIVFIKRVFTSFMDLFSTPSNDHDLIAGINDTRLRDWMIEVSFLISPANEALVT
TNPHWIQKVFEMAMVGRAMALATTFGETSNQRLAATVQSYLRELKKLEESLVNRKVYSSVRYEPFCLWLAGKAGTGKT
TVANIAADKFAEACNYHGTASYHPMSAGQRYMDGLTDQPTVFVDDALCMDLMNDTIFVSLMLNGKSPAVLRLPYSRVD
DKDKLCNFQNMIFSSNFTYFNNVSGVHDSEAFNRRRDLLLYFDYAFKKADDGRSLKEQYTYEDVKIMIKDPKQRDKII
HMEHLDIYKCDPMVDNRTKIERVPGESYADTVMKVIMTAHTEYHILESAKYRKRYMRTNERLAETEGLGLSFDDQLKE
YSKIFESDQYKMMTPELQKWSKKCQIACGRNDDLLAEPQIGDEINPKIAVNYVTPFGDLKGPSTLCLHHNVRPGDCCY
DANKKWFLSMARDRSGQGAPYGVCKIRQPDGLVTELGNCLFAEAESRRAFLKLFLYGGYHSDEVRRFRDSGLPYHQLP
GLTLTKEMCDLIPQISEVKLTPQVSMLDSTQAQIRSTYEKVGDRLFNIATGVACLTGSLFFTLIQVFKLLWQIFEAIG
FIAAGVIGLVVTYRMFFGGDKDVEEPQIHPSGDYSTLKSGKKTIRQRTINLCKGAIPNISLSDVEGQQSSLDGVLNKI
ASNTVIIXGXYEDNGVKRIARARCLALFARRLLVLRHYFEYFRYKGVXKVTVVSRKGDCAVEYDLEELQFAWSDDCGY
GTCDLPQSYPVNFKKITQLICSDKFSRSYPSNMMIVEHNFSNLHTIDVYAKVMGDSKKIPQQPGMSSWTIHGGFEYAW
GGKGKCGSLLIVPSLSSPIVGIHSAGIKEIRGFAEVLFRETFEEPKDLVEFVEPQLDNRDNVFGLDGFYSQEGALDPD
MAPHSSTETAIRPSEISGVFPITTEPAPLSGKDPRLEQAGDVLKIGVSKRCEPIKEFDPIDVQIANTDYEERILFSVK
PMRTPIEPLTVAQAIEGLPIKGMAEPIQMSTSEGFPWRNIRPPNCSNKSWMFRLSTYSDGRMKVEGICKELKEILDHK
QKLREYGRVPCSYFTTCLKDARILREKVKVPGKTRVFEMSPIELTIAQRQYFYDYISSFINSRFEHTIGINPDGYEWS
SLAESLLGFSPHILTADYSSYGPRLSINLLKMAFSTASKWCEKYEECSEEERATRLLVRECLKNEVSHGLHIARDLVF
RPSSGLPSGNCETVNKNTECNSRYIRIAYLGILKEKAPHYADMYWFNKMVLMYSNGDDLIMAVKPQIIEWFNNVTLIE
FFSRYNLKMTDALKSGQVRPYCSLVEATYLKRGFLPHPFREGQWLAPLEKASITDTANWIWKSPDMRAASLVNSEMSC
RLAYSHGPKFYNEVCEKIKRAWREKDVNFEYPSWESLDNHVWDGAEGPKYCF"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "polyprotein"
                    }
                  },
                  location int {
                    from 0,
                    to 2751,
                    id gi 067065065076255561
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25557", version 1}, gi 067065065076255571
          },
          descr {
            title "MAG: hypothetical protein no blastphit [Iflavirus]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 70,
            seq-data iupacaa "MGLKVLSIAFNSLGPCTNEIMVAYVIGVLTCFLVFMALAAIIICVKRR
RHQRLYEERYGFGDIEMQPLLI"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "hypothetical protein no blastphit"
                    }
                  },
                  location int {
                    from 0,
                    to 69,
                    id gi 067065065076255571
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255561,
              location int {
                from 699,
                to 8957,
                strand plus,
                id gi 0670650651118451
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            },
            {
              id local id 4,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255571,
              location int {
                from 8926,
                to 9138,
                strand plus,
                id gi 0670650651118451
              },
              xref {
                {
                  id local id 5
                },
                {
                  id local id 6
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
序列分析