Bunyavirales isolate Culex/Masinga5M3/2023/Bunyavirus:segment:S Nucleocapsid protein (capsid) gene, complete cds.
Seq-submit ::= {
sub {
contact {
contact {
name name {
last "Xia",
first "Han",
middle "",
initials "",
suffix "",
title ""
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
country "China",
street "NO.44 Xiaohongshan",
email "hanxia@wh.iov.cn",
postal-code "430071"
}
}
},
cit {
authors {
names std {
{
name name {
last "Xia",
first "Han",
initials "H."
}
}
},
affil std {
affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
div "Microbial Resource and Bioinformatic Center",
city "Wuhan",
sub "Hubei",
country "China",
street "NO.44 Xiaohongshan",
postal-code "430071"
}
},
date std {
year 2025,
month 7,
day 15
}
},
subtype new,
tool "table2asn 1.28.1094"
},
data entrys {
set {
class nuc-prot,
descr {
source {
org {
taxname "Bunyavirales",
orgname {
mod {
{
subtype isolate,
subname "Culex/Masinga5M3/2023/Bunyavirus:segment:S"
},
{
subtype nat-host,
subname "Culex; Host_sex: UNKNOWN"
},
{
subtype metagenome-source,
subname "mosquito metagenome"
}
},
gcode 1
}
},
subtype {
{
subtype country,
name "Kenya: Masinga"
},
{
subtype environmental-sample,
name ""
},
{
subtype collection-date,
name "2023"
},
{
subtype metagenomic,
name ""
}
}
},
user {
type str "StructuredComment",
data {
{
label str "StructuredCommentPrefix",
data str "##Assembly-Data-START##"
},
{
label str "Assembly Method",
data str "Megahit v. 1.2.9"
},
{
label str "Sequencing Technology",
data str "Illumina"
},
{
label str "StructuredCommentSuffix",
data str "##Assembly-Data-END##"
}
}
},
create-date std {
year 2025,
month 7,
day 15
}
},
seq-set {
seq {
id {
genbank { accession "C_AA111851", version 1}, gi 0670650651118511
},
descr {
user {
class "1.0",
type str "AutodefOptions",
data {
{label str "UseLabels", data bool TRUE},
{label str "LeaveParenthetical", data bool TRUE},
{label str "SpecifyNuclearProduct", data bool TRUE},
{label str "MaxMods", data int 0},
{label str "FeatureListType", data str "List All Features"},
{label str "MiscFeatRule", data str "Delete"},
{label str "HIVRule", data str "WantBoth"},
{label str "ModifierList",
data fields { {label str "OrgMods", num 1,
data strs {"isolate" }}}}}},
molinfo {
biomol genomic
},
user {
type str "Submission",
data {
{
label str "AdditionalComment",
data str "GenBase"
}
}
}
},
inst {
repr raw,
mol rna,
length 2324,
topology linear,
strand ss,
seq-data ncbi4na '281482114418141418482284111414181418418888488284
224114284442814148442148884884144114148884841444184418418848414841414841414814
214884842444844811448841414844144848441441114484411448441412211148418444481818
484111114188118844111481824144F48284144141122488484812414411488884814282884888
184822142244422118242842188848212822114882422114242828422428428488418842828848
828421828188482114414144818288428412148822818821218844812182828224418144284111
411414282828488842112114428884481411182812884148114281418288422418288488114882
214141428488228428188482214114881111114488284211122148114124142821122214188144
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122114148222418488284128284422244188428421421882221182212428284114284424428828
414828112122141141482182142282821418488448884428888412424284441111482284842212
228481428221148488884412121418184482414121441428482844182128882281428148284144
284112214282188441442114112114428412228418242281844288812218241824428284842824
22842442141841112142814412211488284442812F184414284418442884424414188421421411
422244282114484414428281482114418141418482284111414181418418888488284224114284
442814148442148884884144114148884841444184418418848414841414841414814214884842
444844811448841414844144848441441114484411448441412211148418444481818821284888
12128814282144881148488182888848481818FFFFFFFFFF181212111141811212881122841428
114848111214841181812222182128884482822122882212288822822121228221282821122881
221222421211284281282821282821282121182182218222821211828288228211211128422128
281422214288842841114114142828284888421121144288844814111828128841481142814182
884224182884881148822141414284882284281884822141148811111144882842111221481141
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284128212828214214182182114224148844182421822841484122212884484148822184144288
821184211122884844148822821144888184148121144488884184841141441882148822814814
28882242211822'H
},
annot {
{
data ftable {
{
id local id 2,
data gene {
locus "capsid"
},
location int {
from 282,
to 1535,
strand plus,
id gi 0670650651118511
},
xref {
{
id local id 1
}
}
},
{
id local id 3,
data rna {
type mRNA,
ext name "Nucleocapsid protein"
},
location int {
from 282,
to 1535,
strand plus,
id gi 0670650651118511
},
xref {
{
data gene {
locus "capsid"
}
},
{
id local id 1
}
}
}
}
}
}
},
seq {
id {
genbank { accession "C_AAL25563", version 1}, gi 067065065076255631
},
descr {
title "MAG: Nucleocapsid protein [Bunyavirales]",
molinfo {
biomol peptide,
tech concept-trans
}
},
inst {
repr raw,
mol aa,
length 417,
seq-data iupacaa "MSSRANRCICHSKFAKRSAAAVDCSCSASIVKERYLADSSYSHWYISP
DRLKEELSVCNKALVEIYLSKLDLADLVKFQRAVPAIVQKLKKVLQTSKTSSTQIRTTASQASEERGKPTLGSVMSDS
LSADHQAELDRILSDPLGEFPDAFNANLVEFLKVYEYKGFDVKRIQFLVAFRQSRLKSGSVLLLEDNKKGKSIELTGH
QNLNQVILLCIALFNHRGNNLEAIKSGLGTGLIEATFTTFVSNMGLKSNVIEKGAKTKSPDVLTLARIAAAFPIHALK
LAASESNTRRVISLSDVGLAFDALGKVLCHPVAPSVLDTDMVETGAVWITFLASLRLNQLIGGKNKADPDRLWLYHRS
ALCSPAADETARTKFWATMELDGLAEIAAEARLKVEALVKDRDVLKEIDDFVLPKLG"
},
annot {
{
data ftable {
{
data prot {
name {
"Nucleocapsid protein"
}
},
location int {
from 0,
to 416,
id gi 067065065076255631
}
}
}
}
}
}
},
annot {
{
data ftable {
{
id local id 1,
data cdregion {
frame one,
code {
id 1
}
},
product whole gi 067065065076255631,
location int {
from 282,
to 1535,
strand plus,
id gi 0670650651118511
},
xref {
{
id local id 2
},
{
id local id 3
}
}
}
}
}
}
}
}
}