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Bunyavirales isolate Culex/Masinga5M3/2023/Bunyavirus:segment:S Nucleocapsid protein (capsid) gene, complete cds.

Accession:
C_AA111851.1

Seq-submit ::= {
  sub {
    contact {
      contact {
        name name {
          last "Xia",
          first "Han",
          middle "",
          initials "",
          suffix "",
          title ""
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          country "China",
          street "NO.44 Xiaohongshan",
          email "hanxia@wh.iov.cn",
          postal-code "430071"
        }
      }
    },
    cit {
      authors {
        names std {
          {
            name name {
              last "Xia",
              first "Han",
              initials "H."
            }
          }
        },
        affil std {
          affil "Wuhan Institute of Virology, Chinese Academy of Sciences",
          div "Microbial Resource and Bioinformatic Center",
          city "Wuhan",
          sub "Hubei",
          country "China",
          street "NO.44 Xiaohongshan",
          postal-code "430071"
        }
      },
      date std {
        year 2025,
        month 7,
        day 15
      }
    },
    subtype new,
    tool "table2asn 1.28.1094"
  },
  data entrys {
    set {
      class nuc-prot,
      descr {
        source {
          org {
            taxname "Bunyavirales",
            orgname {
              mod {
                {
                  subtype isolate,
                  subname "Culex/Masinga5M3/2023/Bunyavirus:segment:S"
                },
                {
                  subtype nat-host,
                  subname "Culex; Host_sex: UNKNOWN"
                },
                {
                  subtype metagenome-source,
                  subname "mosquito metagenome"
                }
              },
              gcode 1
            }
          },
          subtype {
            {
              subtype country,
              name "Kenya: Masinga"
            },
            {
              subtype environmental-sample,
              name ""
            },
            {
              subtype collection-date,
              name "2023"
            },
            {
              subtype metagenomic,
              name ""
            }
          }
        },
        user {
          type str "StructuredComment",
          data {
            {
              label str "StructuredCommentPrefix",
              data str "##Assembly-Data-START##"
            },
            {
              label str "Assembly Method",
              data str "Megahit v. 1.2.9"
            },
            {
              label str "Sequencing Technology",
              data str "Illumina"
            },
            {
              label str "StructuredCommentSuffix",
              data str "##Assembly-Data-END##"
            }
          }
        },
        create-date std {
          year 2025,
          month 7,
          day 15
        }
      },
      seq-set {
        seq {
          id {
genbank { accession "C_AA111851", version 1}, gi 0670650651118511
          },
          descr {

        user {
            class "1.0",
            type str "AutodefOptions",
            data {
                {label str "UseLabels", data bool TRUE},
                {label str "LeaveParenthetical", data bool TRUE},
                {label str "SpecifyNuclearProduct", data bool TRUE},
                {label str "MaxMods", data int 0},
                {label str "FeatureListType", data str "List All Features"},
                {label str "MiscFeatRule", data str "Delete"},
                {label str "HIVRule", data str "WantBoth"},
                {label str "ModifierList",
                    data fields { {label str "OrgMods", num 1,
                            data strs {"isolate" }}}}}},
        
            molinfo {
              biomol genomic
            },
            user {
              type str "Submission",
              data {
                {
                  label str "AdditionalComment",
                  data str "GenBase"
                }
              }
            }
          },
          inst {
            repr raw,
            mol rna,
            length 2324,
            topology linear,
            strand ss,
            seq-data ncbi4na '281482114418141418482284111414181418418888488284
224114284442814148442148884884144114148884841444184418418848414841414841414814
214884842444844811448841414844144848441441114484411448441412211148418444481818
484111114188118844111481824144F48284144141122488484812414411488884814282884888
184822142244422118242842188848212822114882422114242828422428428488418842828848
828421828188482114414144818288428412148822818821218844812182828224418144284111
411414282828488842112114428884481411182812884148114281418288422418288488114882
214141428488228428188482214114881111114488284211122148114124142821122214188144
121128428821211428148414414144441111228128281442821482184828412821282821424418
218211422414884418242182284148412221288448414882228418428882118421112288484414
882282114488818414812114448888418484114144188214882281481428882242211822144284
11182844282248288428428441441211211411444811182F182414884128442218214112284112
214482182284282848188428284882112212241448112112288414421181114821448288442128
441282188414428121882128121888482142112184442282114822118488188414111448428111
122114148222418488284128284422244188428421421882221182212428284114284424428828
414828112122141141482182142282821418488448884428888412424284441111482284842212
228481428221148488884412121418184482414121441428482844182128882281428148284144
284112214282188441442114112114428412228418242281844288812218241824428284842824
22842442141841112142814412211488284442812F184414284418442884424414188421421411
422244282114484414428281482114418141418482284111414181418418888488284224114284
442814148442148884884144114148884841444184418418848414841414841414814214884842
444844811448841414844144848441441114484411448441412211148418444481818821284888
12128814282144881148488182888848481818FFFFFFFFFF181212111141811212881122841428
114848111214841181812222182128884482822122882212288822822121228221282821122881
221222421211284281282821282821282121182182218222821211828288228211211128422128
281422214288842841114114142828284888421121144288844814111828128841481142814182
884224182884881148822141414284882284281884822141148811111144882842111221481141
241428211222141881441211284288212114281484144141444441112281282814428214821848
284128212828214214182182114224148844182421822841484122212884484148822184144288
821184211122884844148822821144888184148121144488884184841141441882148822814814
28882242211822'H
          },
          annot {
            {
              data ftable {
                {
                  id local id 2,
                  data gene {
                    locus "capsid"
                  },
                  location int {
                    from 282,
                    to 1535,
                    strand plus,
                    id gi 0670650651118511
                  },
                  xref {
                    {
                      id local id 1
                    }
                  }
                },
                {
                  id local id 3,
                  data rna {
                    type mRNA,
                    ext name "Nucleocapsid protein"
                  },
                  location int {
                    from 282,
                    to 1535,
                    strand plus,
                    id gi 0670650651118511
                  },
                  xref {
                    {
                      data gene {
                        locus "capsid"
                      }
                    },
                    {
                      id local id 1
                    }
                  }
                }
              }
            }
          }
        },
        seq {
          id {
genbank { accession "C_AAL25563", version 1}, gi 067065065076255631
          },
          descr {
            title "MAG: Nucleocapsid protein [Bunyavirales]",
            molinfo {
              biomol peptide,
              tech concept-trans
            }
          },
          inst {
            repr raw,
            mol aa,
            length 417,
            seq-data iupacaa "MSSRANRCICHSKFAKRSAAAVDCSCSASIVKERYLADSSYSHWYISP
DRLKEELSVCNKALVEIYLSKLDLADLVKFQRAVPAIVQKLKKVLQTSKTSSTQIRTTASQASEERGKPTLGSVMSDS
LSADHQAELDRILSDPLGEFPDAFNANLVEFLKVYEYKGFDVKRIQFLVAFRQSRLKSGSVLLLEDNKKGKSIELTGH
QNLNQVILLCIALFNHRGNNLEAIKSGLGTGLIEATFTTFVSNMGLKSNVIEKGAKTKSPDVLTLARIAAAFPIHALK
LAASESNTRRVISLSDVGLAFDALGKVLCHPVAPSVLDTDMVETGAVWITFLASLRLNQLIGGKNKADPDRLWLYHRS
ALCSPAADETARTKFWATMELDGLAEIAAEARLKVEALVKDRDVLKEIDDFVLPKLG"
          },
          annot {
            {
              data ftable {
                {
                  data prot {
                    name {
                      "Nucleocapsid protein"
                    }
                  },
                  location int {
                    from 0,
                    to 416,
                    id gi 067065065076255631
                  }
                }
              }
            }
          }
        }
      },
      annot {
        {
          data ftable {
            {
              id local id 1,
              data cdregion {
                frame one,
                code {
                  id 1
                }
              },
              product whole gi 067065065076255631,
              location int {
                from 282,
                to 1535,
                strand plus,
                id gi 0670650651118511
              },
              xref {
                {
                  id local id 2
                },
                {
                  id local id 3
                }
              }
            }
          }
        }
      }
    }
  }
}
资助信息
资助标题:Research on Discovery of Arthropod-borne Viral Pathogens and Infection Transmission Risk
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2023QNTJ-03
资助标题:Cross-border Vector-borne Disease Pathogen Surveillance and Port Application
资助机构:Ministry of Science and Technology of the People's Republic of China (MOST)
资助项目:National Key Technologies R&D Program
资助标号:2022YFC2302700
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